Variant report

Variant	rs8095980
Chromosome Location	chr18:30383016-30383017
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs11081782	0.94[ASN][1000 genomes]
rs12607879	0.90[EUR][1000 genomes]
rs1403757	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1539816	0.81[AFR][1000 genomes]
rs17813678	0.93[EUR][1000 genomes]
rs1893244	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1941256	0.93[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9675424	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:30380400-30385000	Enhancers	Primary B cells from peripheral blood	blood
2	chr18:30380600-30385200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr18:30380800-30383200	Enhancers	Fetal Kidney	kidney
4	chr18:30381000-30384400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr18:30381000-30384800	Enhancers	Primary B cells from cord blood	blood
6	chr18:30382800-30384800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
7	chr18:30383000-30383400	Flanking Active TSS	GM12878-XiMat	blood
8	chr18:30383000-30383600	Flanking Active TSS	HepG2	liver

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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