Variant report

Variant rs8112079
Chromosome Location chr19:53216544-53216545
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:53194800-53218800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr19:53202800-53217400 ZNF genes & repeats Liver Liver
3 chr19:53205600-53217400 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
4 chr19:53206600-53217800 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr19:53206600-53227200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr19:53207200-53217600 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
7 chr19:53207200-53218800 Strong transcription Placenta Placenta
8 chr19:53207400-53219400 Strong transcription Dnd41 blood
9 chr19:53208200-53219400 Strong transcription Fetal Muscle Trunk muscle
10 chr19:53208400-53217400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr19:53208400-53218800 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
12 chr19:53209400-53225800 Weak transcription Hela-S3 cervix
13 chr19:53209600-53218200 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr19:53209600-53219200 Weak transcription H9 Cell Line embryonic stem cell
15 chr19:53209600-53219400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr19:53209600-53223800 Weak transcription NHLF lung
17 chr19:53209600-53224000 Weak transcription Pancreatic Islets Pancreatic Islet
18 chr19:53209600-53224000 Weak transcription Right Ventricle heart
19 chr19:53210200-53218800 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr19:53210200-53219000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
21 chr19:53210200-53223400 Weak transcription Colonic Mucosa Colon
22 chr19:53210200-53227000 Weak transcription Fetal Heart heart
23 chr19:53210400-53218200 Weak transcription HUVEC blood vessel
24 chr19:53210400-53219000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr19:53210400-53225200 Weak transcription HMEC breast
26 chr19:53210400-53236600 Weak transcription Psoas Muscle Psoas
27 chr19:53210600-53218600 ZNF genes & repeats Fetal Intestine Small intestine
28 chr19:53210600-53219000 ZNF genes & repeats Primary monocytes fromperipheralblood blood
29 chr19:53210600-53237200 Weak transcription NHDF-Ad bronchial
30 chr19:53210800-53218200 Weak transcription iPS-18 Cell Line embryonic stem cell
31 chr19:53210800-53219000 Strong transcription Ovary ovary
32 chr19:53211000-53219400 Strong transcription Cortex derived primary cultured neurospheres brain
33 chr19:53211400-53217400 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
34 chr19:53211800-53217400 Strong transcription Rectal Mucosa Donor 29 rectum
35 chr19:53212000-53218600 Strong transcription Primary T helper naive cells fromperipheralblood blood
36 chr19:53212200-53227000 Strong transcription Fetal Stomach stomach
37 chr19:53212400-53218600 Strong transcription Primary T helper cells PMA-I stimulated --
38 chr19:53212400-53219800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr19:53212400-53231000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
40 chr19:53212600-53217400 Strong transcription Fetal Adrenal Gland Adrenal Gland
41 chr19:53212600-53218000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
42 chr19:53212600-53219000 Strong transcription Gastric stomach
43 chr19:53212600-53226800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
44 chr19:53212800-53216600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr19:53212800-53216600 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
46 chr19:53212800-53217200 Strong transcription Primary T helper 17 cells PMA-I stimulated --
47 chr19:53212800-53217400 ZNF genes & repeats GM12878-XiMat blood
48 chr19:53212800-53217800 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
49 chr19:53213000-53216600 Strong transcription Brain Germinal Matrix brain
50 chr19:53213000-53218800 Strong transcription Adipose Nuclei Adipose

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