The 2.0 version of rSNPBase

Variant report

Variant rs8139366
Chromosome Location chr22:23543181-23543182
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:23526000-23546000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr22:23526200-23546800 Weak transcription Colonic Mucosa Colon
3 chr22:23526400-23560800 Weak transcription A549 lung
4 chr22:23527000-23547200 Weak transcription Fetal Kidney kidney
5 chr22:23527200-23545400 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr22:23527200-23547000 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr22:23527400-23545400 Weak transcription Duodenum Mucosa Duodenum
8 chr22:23527600-23544200 Strong transcription Fetal Intestine Small intestine
9 chr22:23529600-23552800 Weak transcription Primary T helper naive cells from peripheral blood blood
10 chr22:23530200-23545200 Weak transcription Primary T regulatory cells fromperipheralblood blood
11 chr22:23530400-23545600 Weak transcription Liver Liver
12 chr22:23530400-23558800 Weak transcription Small Intestine intestine
13 chr22:23530600-23545400 Weak transcription Colon Smooth Muscle Colon
14 chr22:23530600-23557200 Weak transcription Primary T killer naive cells fromperipheralblood blood
15 chr22:23530800-23545200 Weak transcription Rectal Smooth Muscle rectum
16 chr22:23530800-23545200 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr22:23530800-23545600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr22:23534000-23545400 Weak transcription Primary B cells from peripheral blood blood
19 chr22:23535000-23556000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr22:23535800-23559400 Weak transcription HUES64 Cell Line embryonic stem cell
21 chr22:23536000-23557200 Weak transcription Hela-S3 cervix
22 chr22:23536200-23543400 Weak transcription Aorta Aorta
23 chr22:23536200-23545400 Weak transcription Brain Cingulate Gyrus brain
24 chr22:23536200-23545600 Weak transcription Stomach Smooth Muscle stomach
25 chr22:23536200-23549800 Weak transcription GM12878-XiMat blood
26 chr22:23536400-23557600 Weak transcription NHLF lung
27 chr22:23536400-23557800 Weak transcription Placenta Amnion Placenta Amnion
28 chr22:23536600-23545600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr22:23536600-23545600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr22:23536600-23546600 Weak transcription HMEC breast
31 chr22:23536600-23557600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr22:23537000-23543400 Strong transcription Fetal Stomach stomach
33 chr22:23538000-23543800 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr22:23538400-23543800 Enhancers Pancreas Pancrea
35 chr22:23538400-23547400 Weak transcription Pancreatic Islets Pancreatic Islet
36 chr22:23538800-23545200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
37 chr22:23538800-23545400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
38 chr22:23539000-23546200 Weak transcription Fetal Brain Male brain
39 chr22:23539400-23545400 Weak transcription Fetal Brain Female brain
40 chr22:23540000-23545400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
41 chr22:23540600-23544400 Weak transcription Primary neutrophils fromperipheralblood blood
42 chr22:23540600-23545400 Weak transcription Primary monocytes fromperipheralblood blood
43 chr22:23540600-23545400 Weak transcription Fetal Heart heart
44 chr22:23540800-23545200 Weak transcription Primary T cells from cord blood blood
45 chr22:23540800-23546200 Weak transcription Primary B cells from cord blood blood
46 chr22:23541000-23543200 Weak transcription Brain Anterior Caudate brain
47 chr22:23541000-23543200 Enhancers Spleen Spleen
48 chr22:23541000-23545800 Weak transcription Ovary ovary
49 chr22:23541200-23543400 Enhancers Fetal Adrenal Gland Adrenal Gland
50 chr22:23541200-23545400 Weak transcription Right Atrium heart

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Last update: Aug 31, 2015