Variant report

Variant	rs826792
Chromosome Location	chr7:147028591-147028592
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 35 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10239550	0.82[ASN][1000 genomes]
rs10269335	1.00[YRI][hapmap]
rs12112534	0.81[ASN][1000 genomes]
rs1304809	1.00[CEU][hapmap]
rs2620475	0.80[ASN][1000 genomes]
rs2697456	1.00[YRI][hapmap]
rs700306	0.83[ASN][1000 genomes]
rs700311	0.83[ASN][1000 genomes]
rs700312	0.84[ASN][1000 genomes]
rs700313	0.83[ASN][1000 genomes]
rs826655	0.80[ASN][1000 genomes]
rs826656	0.84[ASN][1000 genomes]
rs826657	0.84[ASN][1000 genomes]
rs826658	0.83[ASN][1000 genomes]
rs826659	0.84[ASN][1000 genomes]
rs826660	0.84[ASN][1000 genomes]
rs826661	0.84[ASN][1000 genomes]
rs826662	0.84[ASN][1000 genomes]
rs826663	0.84[ASN][1000 genomes]
rs826664	0.84[ASN][1000 genomes]
rs826793	0.84[ASN][1000 genomes]
rs826812	0.84[ASN][1000 genomes]
rs826813	0.82[ASN][1000 genomes]
rs826814	0.82[ASN][1000 genomes]
rs826823	1.00[CEU][hapmap];1.00[YRI][hapmap];0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:10 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv933033	chr7:146720301-147081560	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
2	nsv1033898	chr7:146721499-147081768	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
3	nsv931005	chr7:146730472-147381257	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	7 gene(s)	inside rSNPs	diseases
4	nsv889396	chr7:146854133-147035067	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
5	nsv1033398	chr7:146989035-147101573	Enhancers Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region miRNA	1 gene(s)	inside rSNPs	n/a
6	nsv465192	chr7:147001077-147086045	Enhancers Weak transcription	TF binding region CpG island Chromatin interactive region miRNA	1 gene(s)	inside rSNPs	n/a
7	nsv608943	chr7:147001077-147086045	Weak transcription Enhancers	TF binding region CpG island Chromatin interactive region miRNA	1 gene(s)	inside rSNPs	n/a
8	nsv526693	chr7:147011388-147054250	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
9	nsv1018715	chr7:147012067-147052280	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
10	nsv608953	chr7:147021553-147040881	Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
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