Variant report
Variant | rs834811 |
---|---|
Chromosome Location | chr7:135884571-135884572 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
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No data |
rs_ID | r2[population] |
---|---|
rs4732179 | 0.81[JPT][hapmap] |
rs834813 | 0.82[AMR][1000 genomes] |
rs834819 | 0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rs834821 | 0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs844327 | 0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.81[ASN][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page:
1
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv967498 | chr7:135874531-135896375 | Weak transcription | Chromatin interactive regionlncRNA | n/a | inside rSNPs | n/a |
2 | nsv889236 | chr7:135884571-135943264 | ZNF genes & repeats Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |