The 2.0 version of rSNPBase

Variant report

Variant rs846945
Chromosome Location chr7:105298577-105298578
allele C/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:105247000-105308800 Strong transcription Monocytes-CD14+_RO01746 blood
2 chr7:105272400-105305600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr7:105280600-105305400 Weak transcription Fetal Kidney kidney
4 chr7:105280800-105319400 Weak transcription Aorta Aorta
5 chr7:105283200-105303400 Weak transcription Primary T killer naive cells fromperipheralblood blood
6 chr7:105283400-105299800 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr7:105284000-105313200 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr7:105286400-105307800 Strong transcription Primary monocytes fromperipheralblood blood
9 chr7:105288600-105306400 Strong transcription Dnd41 blood
10 chr7:105288800-105307000 Strong transcription Fetal Thymus thymus
11 chr7:105289400-105306800 Strong transcription Thymus Thymus
12 chr7:105289800-105303400 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr7:105289800-105313200 Weak transcription Psoas Muscle Psoas
14 chr7:105290200-105301600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr7:105290400-105307800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
16 chr7:105290400-105311800 Weak transcription NHEK skin
17 chr7:105290400-105321800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr7:105290800-105303400 Weak transcription NHLF lung
19 chr7:105290800-105306000 Weak transcription NHDF-Ad bronchial
20 chr7:105290800-105311000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr7:105291000-105305400 Weak transcription Hela-S3 cervix
22 chr7:105291200-105305400 Weak transcription HSMMtube muscle
23 chr7:105291600-105307000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr7:105291800-105299000 Weak transcription Primary T helper naive cells from peripheral blood blood
25 chr7:105292400-105301200 Weak transcription Primary hematopoietic stem cells blood
26 chr7:105292600-105299600 Weak transcription Fetal Intestine Large intestine
27 chr7:105293000-105301400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
28 chr7:105294200-105304600 Weak transcription Pancreatic Islets Pancreatic Islet
29 chr7:105295000-105299600 Weak transcription Liver Liver
30 chr7:105295000-105300400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
31 chr7:105295000-105305400 Weak transcription HepG2 liver
32 chr7:105295200-105299800 Weak transcription Duodenum Mucosa Duodenum
33 chr7:105296400-105299800 Weak transcription Breast Myoepithelial Primary Cells Breast
34 chr7:105296400-105313000 Weak transcription Brain Angular Gyrus brain
35 chr7:105296400-105313200 Weak transcription Skeletal Muscle Male skeletal muscle
36 chr7:105296600-105299200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr7:105296600-105299400 Weak transcription Primary T helper cells fromperipheralblood blood
38 chr7:105296600-105299400 Weak transcription Spleen Spleen
39 chr7:105296600-105301600 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr7:105296600-105303600 Weak transcription Brain Anterior Caudate brain
41 chr7:105296600-105306000 Weak transcription ES-WA7 Cell Line embryonic stem cell
42 chr7:105296600-105313200 Weak transcription Brain Hippocampus Middle brain
43 chr7:105296600-105313800 Weak transcription Small Intestine intestine
44 chr7:105296800-105299400 Weak transcription Primary T cells from cord blood blood
45 chr7:105296800-105299800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr7:105296800-105300000 Weak transcription Colonic Mucosa Colon
47 chr7:105296800-105300000 Weak transcription Fetal Adrenal Gland Adrenal Gland
48 chr7:105296800-105300200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
49 chr7:105296800-105300600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
50 chr7:105296800-105301200 Weak transcription Skeletal Muscle Female skeletal muscle

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Last update: Aug 31, 2015