Variant report

Variant	rs851733
Chromosome Location	chr7:147362190-147362191
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10232275	1.00[EUR][1000 genomes]
rs11971876	1.00[EUR][1000 genomes]
rs28444108	1.00[EUR][1000 genomes]
rs55671052	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs55713890	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs55859712	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs56211187	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs59050274	0.84[AFR][1000 genomes]
rs73741205	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73741207	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73741209	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73741212	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73741213	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73741214	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs851732	0.97[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs851734	0.89[AFR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv931005	chr7:146730472-147381257	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:147361400-147362200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
2	chr7:147362000-147362600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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