Variant report

Variant	rs851734
Chromosome Location	chr7:147362105-147362106
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 48 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:47)

rs_ID	r²[population]
rs10232275	1.00[EUR][1000 genomes]
rs11971876	1.00[EUR][1000 genomes]
rs17170638	1.00[CHB][hapmap];0.82[AMR][1000 genomes]
rs2190915	1.00[CHB][hapmap];0.84[AMR][1000 genomes]
rs2215154	0.84[AMR][1000 genomes]
rs2373173	0.82[AMR][1000 genomes]
rs2373174	0.82[AMR][1000 genomes]
rs2373175	1.00[CHB][hapmap];0.82[AMR][1000 genomes]
rs2373176	1.00[CHB][hapmap];0.82[AMR][1000 genomes]
rs28444108	1.00[EUR][1000 genomes]
rs2888514	0.82[AMR][1000 genomes]
rs2888515	1.00[CHB][hapmap];0.82[AMR][1000 genomes]
rs4310123	1.00[CHB][hapmap];0.84[AMR][1000 genomes]
rs4379380	1.00[CHB][hapmap];0.87[AMR][1000 genomes]
rs4383899	1.00[CHB][hapmap]
rs4383900	1.00[CHB][hapmap];0.87[AMR][1000 genomes]
rs4427087	0.84[AMR][1000 genomes]
rs4436047	1.00[CHB][hapmap];0.87[AMR][1000 genomes]
rs4486105	0.84[AMR][1000 genomes]
rs4487669	0.84[AMR][1000 genomes]
rs4520083	1.00[CHB][hapmap];0.84[AMR][1000 genomes]
rs55671052	0.92[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs55713890	0.92[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs55859712	0.92[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs56211187	0.92[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs59050274	0.92[AFR][1000 genomes]
rs6964327	1.00[CHB][hapmap]
rs6964959	1.00[CHB][hapmap]
rs6970360	1.00[CHB][hapmap]
rs731565	1.00[CHB][hapmap]
rs73741205	0.92[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73741207	0.92[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73741209	0.92[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73741212	0.92[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73741213	0.92[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73741214	0.92[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs7457657	1.00[CHB][hapmap];0.82[AMR][1000 genomes]
rs758259	1.00[CHB][hapmap];0.82[AMR][1000 genomes]
rs7779787	1.00[CHB][hapmap]
rs7786677	1.00[CHB][hapmap]
rs7799323	1.00[CHB][hapmap]
rs7803219	1.00[CHB][hapmap];0.82[AMR][1000 genomes]
rs851726	1.00[CHB][hapmap]
rs851727	1.00[CHB][hapmap]
rs851732	0.90[YRI][hapmap];0.91[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs851733	0.89[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs971440	1.00[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv931005	chr7:146730472-147381257	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:147361400-147362200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
2	chr7:147362000-147362600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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