Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs1102704	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1102706	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1102707	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12136569	0.84[EUR][1000 genomes]
rs17370861	0.88[CHB][hapmap];0.86[JPT][hapmap]
rs704845	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs859618	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs859619	0.94[ASN][1000 genomes]
rs859621	0.89[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs859622	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs859623	0.82[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs859631	0.86[EUR][1000 genomes]
rs859633	0.89[CEU][hapmap];0.88[CHB][hapmap];0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs859634	0.84[EUR][1000 genomes]
rs859636	0.84[EUR][1000 genomes]
rs859637	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs859638	0.84[EUR][1000 genomes]
rs859639	0.84[EUR][1000 genomes]
rs859641	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs859643	0.84[EUR][1000 genomes]
rs859644	0.84[EUR][1000 genomes]
rs859647	0.86[EUR][1000 genomes]
rs859648	0.86[EUR][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:172674000-172681000	Enhancers	Primary T helper cells PMA-I stimulated	--
2	chr1:172674400-172683000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr1:172674400-172683000	Weak transcription	HUES48 Cell Line	embryonic stem cell
4	chr1:172674600-172682800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
5	chr1:172678200-172683000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
6	chr1:172678400-172685800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
7	chr1:172679000-172685400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
8	chr1:172679000-172685400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--

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