Variant report

Variant rs870693
Chromosome Location chr9:72081288-72081289
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:72036600-72082600 Weak transcription Rectal Smooth Muscle rectum
2 chr9:72044200-72084400 Weak transcription Fetal Intestine Small intestine
3 chr9:72045000-72084400 Weak transcription Fetal Intestine Large intestine
4 chr9:72046400-72085600 Weak transcription Colon Smooth Muscle Colon
5 chr9:72047000-72081800 Weak transcription Fetal Kidney kidney
6 chr9:72056000-72082600 Weak transcription Pancreas Pancrea
7 chr9:72064600-72084200 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr9:72064600-72084200 Weak transcription Rectal Mucosa Donor 29 rectum
9 chr9:72064800-72083800 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr9:72070800-72085600 Weak transcription Gastric stomach
11 chr9:72072400-72084000 Weak transcription Fetal Heart heart
12 chr9:72077200-72086800 Weak transcription Fetal Brain Male brain
13 chr9:72077400-72081400 Weak transcription Brain Anterior Caudate brain
14 chr9:72077800-72082600 Weak transcription Aorta Aorta
15 chr9:72078400-72081400 Enhancers Liver Liver
16 chr9:72078400-72084000 Weak transcription Placenta Placenta
17 chr9:72079000-72084000 Weak transcription HUVEC blood vessel
18 chr9:72079000-72086400 Weak transcription H9 Cell Line embryonic stem cell
19 chr9:72079000-72091600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
20 chr9:72079200-72086200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr9:72079600-72082200 Strong transcription Fetal Stomach stomach
22 chr9:72079600-72083000 Strong transcription Brain Inferior Temporal Lobe brain
23 chr9:72079800-72082400 Strong transcription Spleen Spleen
24 chr9:72079800-72082800 Strong transcription Brain Germinal Matrix brain
25 chr9:72079800-72085000 Weak transcription Duodenum Mucosa Duodenum
26 chr9:72080000-72081600 Enhancers Ovary ovary
27 chr9:72080000-72083000 Strong transcription Brain Cingulate Gyrus brain
28 chr9:72080200-72081400 Enhancers Right Atrium heart
29 chr9:72080200-72081400 Enhancers Skeletal Muscle Male skeletal muscle
30 chr9:72080200-72081400 Enhancers Skeletal Muscle Female skeletal muscle
31 chr9:72080200-72083200 Strong transcription Brain Angular Gyrus brain
32 chr9:72080400-72081400 Genic enhancers Stomach Smooth Muscle stomach
33 chr9:72080400-72082400 Strong transcription Brain Hippocampus Middle brain
34 chr9:72080400-72089400 Weak transcription Fetal Thymus thymus
35 chr9:72080600-72081400 Enhancers Left Ventricle heart
36 chr9:72080600-72081800 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr9:72080600-72081800 Strong transcription Fetal Adrenal Gland Adrenal Gland
38 chr9:72080600-72082600 Strong transcription Fetal Brain Female brain
39 chr9:72080800-72081400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr9:72080800-72081600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
41 chr9:72080800-72081600 Enhancers HSMM muscle
42 chr9:72080800-72081600 Enhancers HSMMtube muscle
43 chr9:72080800-72081600 Enhancers NHDF-Ad bronchial
44 chr9:72080800-72081800 Genic enhancers Breast Myoepithelial Primary Cells Breast
45 chr9:72080800-72081800 Genic enhancers Fetal Muscle Leg muscle
46 chr9:72080800-72082000 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
47 chr9:72080800-72082800 Strong transcription Rectal Mucosa Donor 31 rectum
48 chr9:72081000-72081600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr9:72081000-72081600 Enhancers Esophagus oesophagus
50 chr9:72081000-72082000 ZNF genes & repeats Lung lung

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