Variant report

Variant	rs871577
Chromosome Location	chr1:71222493-71222494
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10443262	0.85[CHB][hapmap];0.90[JPT][hapmap]
rs1108801	1.00[ASN][1000 genomes]
rs12033260	1.00[ASN][1000 genomes]
rs12046339	1.00[ASN][1000 genomes]
rs12729410	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1327451	0.84[ASN][1000 genomes]
rs1327453	0.83[ASN][1000 genomes]
rs1327460	0.93[CHB][hapmap];0.90[JPT][hapmap]
rs1343786	0.83[ASN][1000 genomes]
rs1409985	0.93[CHB][hapmap];0.90[JPT][hapmap];0.81[ASN][1000 genomes]
rs1889599	0.97[ASN][1000 genomes]
rs2225025	0.85[CHB][hapmap];0.84[JPT][hapmap]
rs2421783	1.00[ASN][1000 genomes]
rs34384777	1.00[ASN][1000 genomes]
rs4650085	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7530345	0.92[CHB][hapmap];0.95[JPT][hapmap]
rs7533733	0.92[CHB][hapmap];0.95[JPT][hapmap];0.81[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:71221800-71230600	Weak transcription	K562	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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