Variant report

Variant rs881987
Chromosome Location chr9:569924-569925
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:547600-571200 Weak transcription Aorta Aorta
2 chr9:549800-593800 Weak transcription Lung lung
3 chr9:552400-574000 Weak transcription Right Ventricle heart
4 chr9:559000-571000 Weak transcription Psoas Muscle Psoas
5 chr9:559000-573600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr9:561800-570000 Weak transcription Fetal Lung lung
7 chr9:563000-572600 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr9:564600-571000 Weak transcription Rectal Mucosa Donor 29 rectum
9 chr9:565800-571000 Weak transcription Breast Myoepithelial Primary Cells Breast
10 chr9:565800-571000 Weak transcription NHEK skin
11 chr9:565800-573800 Weak transcription HMEC breast
12 chr9:565800-574000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr9:566600-571000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr9:566600-573800 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr9:567000-573000 Enhancers Fetal Intestine Large intestine
16 chr9:567200-571800 Enhancers Liver Liver
17 chr9:567200-572400 Enhancers Fetal Intestine Small intestine
18 chr9:567800-570400 Weak transcription Brain Anterior Caudate brain
19 chr9:567800-570400 Weak transcription Brain Hippocampus Middle brain
20 chr9:567800-573800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr9:568000-571200 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr9:568600-570400 Weak transcription Stomach Mucosa stomach
23 chr9:569200-571000 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr9:569200-574000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
25 chr9:569200-574000 Weak transcription Gastric stomach
26 chr9:569400-570400 Weak transcription Right Atrium heart
27 chr9:569400-571000 Weak transcription Duodenum Mucosa Duodenum
28 chr9:569400-571400 Enhancers Brain Substantia Nigra brain
29 chr9:569400-572000 Enhancers Brain Cingulate Gyrus brain
30 chr9:569400-573600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr9:569600-570400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr9:569600-570400 Weak transcription Left Ventricle heart
33 chr9:569600-570400 Weak transcription Pancreas Pancrea
34 chr9:569600-570600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr9:569600-571000 Weak transcription Ovary ovary
36 chr9:569600-574000 Weak transcription Esophagus oesophagus
37 chr9:569800-570200 Weak transcription A549 lung
38 chr9:569800-570600 Flanking Active TSS Fetal Heart heart
39 chr9:569800-571600 Enhancers Brain Inferior Temporal Lobe brain

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