The 2.0 version of rSNPBase

Variant report

Variant rs888098
Chromosome Location chr2:37684741-37684742
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:37677000-37686400 Weak transcription Fetal Lung lung
2 chr2:37677800-37695400 Weak transcription Aorta Aorta
3 chr2:37681800-37686800 Enhancers NH-A brain
4 chr2:37682000-37684800 Enhancers NHEK skin
5 chr2:37682000-37688400 Enhancers Fetal Heart heart
6 chr2:37682200-37684800 Enhancers Primary T killer naive cells fromperipheralblood blood
7 chr2:37682800-37684800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
8 chr2:37682800-37685800 Weak transcription Rectal Smooth Muscle rectum
9 chr2:37682800-37686400 Weak transcription Fetal Kidney kidney
10 chr2:37682800-37688000 Enhancers HUVEC blood vessel
11 chr2:37683000-37684800 Enhancers Primary hematopoietic stem cells short term culture blood
12 chr2:37683000-37685000 Enhancers Primary T cells fromperipheralblood blood
13 chr2:37683200-37685400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
14 chr2:37683400-37688400 Enhancers HSMM muscle
15 chr2:37683600-37687200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
16 chr2:37683600-37688600 Enhancers NHDF-Ad bronchial
17 chr2:37683800-37684800 Enhancers Primary T cells from cord blood blood
18 chr2:37683800-37685200 Enhancers Primary T helper naive cells from peripheral blood blood
19 chr2:37683800-37685200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
20 chr2:37683800-37686600 Weak transcription Stomach Smooth Muscle stomach
21 chr2:37683800-37688600 Enhancers NHLF lung
22 chr2:37684000-37685800 Weak transcription HMEC breast
23 chr2:37684000-37687200 Weak transcription Adipose Nuclei Adipose
24 chr2:37684000-37687600 Weak transcription Lung lung
25 chr2:37684000-37687600 Weak transcription Right Ventricle heart
26 chr2:37684000-37687600 Weak transcription Skeletal Muscle Female skeletal muscle
27 chr2:37684000-37688200 Enhancers Primary T helper cells PMA-I stimulated --
28 chr2:37684000-37691200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr2:37684200-37685000 Enhancers Primary T helper cells fromperipheralblood blood
30 chr2:37684200-37685000 Enhancers Primary T killer memory cells from peripheral blood blood
31 chr2:37684200-37685200 Enhancers Primary T regulatory cells fromperipheralblood blood
32 chr2:37684200-37685400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr2:37684200-37685600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
34 chr2:37684200-37686000 Enhancers Primary T helper 17 cells PMA-I stimulated --
35 chr2:37684200-37686200 Weak transcription Colon Smooth Muscle Colon
36 chr2:37684200-37686400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr2:37684200-37687200 Weak transcription Right Atrium heart
38 chr2:37684200-37688600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
39 chr2:37684400-37684800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr2:37684400-37684800 Enhancers Primary T helper naive cells fromperipheralblood blood
41 chr2:37684400-37685200 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr2:37684400-37685200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr2:37684400-37685200 Enhancers K562 blood
44 chr2:37684400-37685200 Flanking Active TSS Osteobl bone
45 chr2:37684400-37685400 Weak transcription Fetal Adrenal Gland Adrenal Gland
46 chr2:37684400-37686600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr2:37684400-37686600 Weak transcription Duodenum Smooth Muscle Duodenum
48 chr2:37684400-37686800 Weak transcription Thymus Thymus
49 chr2:37684400-37688600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
50 chr2:37684600-37684800 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015