Variant report

Variant rs888773
Chromosome Location chr5:167887431-167887432
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:167812600-167896400 Weak transcription Colonic Mucosa Colon
2 chr5:167829000-167896800 Weak transcription Stomach Mucosa stomach
3 chr5:167837000-167896800 Weak transcription Brain Hippocampus Middle brain
4 chr5:167850800-167895600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr5:167852200-167900400 Strong transcription Liver Liver
6 chr5:167862000-167897000 Weak transcription Brain Substantia Nigra brain
7 chr5:167862200-167891000 Weak transcription NHDF-Ad bronchial
8 chr5:167863800-167899600 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr5:167864400-167897600 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr5:167869800-167895600 Weak transcription NH-A brain
11 chr5:167874600-167899600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr5:167875000-167896800 Weak transcription Fetal Lung lung
13 chr5:167875200-167889200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
14 chr5:167875400-167891400 Weak transcription Brain Angular Gyrus brain
15 chr5:167876400-167902200 Strong transcription Breast Myoepithelial Primary Cells Breast
16 chr5:167877400-167895600 Weak transcription Osteobl bone
17 chr5:167877600-167896800 Strong transcription iPS-20b Cell Line embryonic stem cell
18 chr5:167877800-167894600 Weak transcription Fetal Brain Male brain
19 chr5:167878200-167897200 Strong transcription Fetal Intestine Large intestine
20 chr5:167878400-167898000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr5:167879000-167889800 Strong transcription Cortex derived primary cultured neurospheres brain
22 chr5:167879000-167897400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
23 chr5:167879600-167897200 Strong transcription HUES64 Cell Line embryonic stem cell
24 chr5:167880000-167888600 Strong transcription HUES6 Cell Line embryonic stem cell
25 chr5:167880200-167896200 Strong transcription H1 Cell Line embryonic stem cell
26 chr5:167880200-167900000 Strong transcription Duodenum Mucosa Duodenum
27 chr5:167880400-167893000 Strong transcription Brain Anterior Caudate brain
28 chr5:167880400-167898200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr5:167880800-167890000 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr5:167880800-167897400 Strong transcription HUES48 Cell Line embryonic stem cell
31 chr5:167881000-167896600 Strong transcription Fetal Brain Female brain
32 chr5:167881200-167901800 Strong transcription Placenta Placenta
33 chr5:167881800-167893200 Strong transcription NHEK skin
34 chr5:167882600-167888200 Strong transcription iPS-18 Cell Line embryonic stem cell
35 chr5:167884000-167887800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr5:167884200-167888600 Strong transcription H9 Cell Line embryonic stem cell
37 chr5:167884200-167893600 Strong transcription Pancreas Pancrea
38 chr5:167884200-167895200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr5:167884400-167888600 Strong transcription HepG2 liver
40 chr5:167884600-167889600 Strong transcription Hela-S3 cervix
41 chr5:167884800-167889800 Strong transcription Esophagus oesophagus
42 chr5:167884800-167901400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
43 chr5:167885000-167887800 Weak transcription Lung lung
44 chr5:167885000-167903000 Strong transcription A549 lung
45 chr5:167885200-167890800 Weak transcription Brain Inferior Temporal Lobe brain
46 chr5:167885200-167891800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
47 chr5:167885200-167900400 Strong transcription Fetal Intestine Small intestine
48 chr5:167885200-167902400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr5:167885400-167895600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr5:167885600-167888000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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