The 2.0 version of rSNPBase

Variant report

Variant rs898876
Chromosome Location chr1:223930510-223930511
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:223915200-223930800 Weak transcription Primary T cells from cord blood blood
2 chr1:223915400-223933000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
3 chr1:223915400-223933000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr1:223915400-223936200 Weak transcription Primary T killer naive cells fromperipheralblood blood
5 chr1:223915800-223931600 Weak transcription Primary T killer memory cells from peripheral blood blood
6 chr1:223916600-223932600 Weak transcription Fetal Brain Female brain
7 chr1:223919200-223935600 Strong transcription Monocytes-CD14+_RO01746 blood
8 chr1:223919200-223936200 Strong transcription Primary monocytes fromperipheralblood blood
9 chr1:223919800-223931200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
10 chr1:223921200-223932800 Weak transcription Primary B cells from peripheral blood blood
11 chr1:223921200-223936000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
12 chr1:223921400-223931400 Weak transcription Rectal Smooth Muscle rectum
13 chr1:223921600-223932800 Weak transcription Liver Liver
14 chr1:223921600-223936600 Weak transcription Pancreatic Islets Pancreatic Islet
15 chr1:223921800-223933400 Weak transcription Brain Angular Gyrus brain
16 chr1:223921800-223935600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr1:223921800-223936000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr1:223922200-223934600 Weak transcription HUES64 Cell Line embryonic stem cell
19 chr1:223922200-223935600 Weak transcription Fetal Brain Male brain
20 chr1:223922800-223930600 Weak transcription Spleen Spleen
21 chr1:223922800-223930800 Weak transcription iPS-20b Cell Line embryonic stem cell
22 chr1:223922800-223931600 Weak transcription Brain Germinal Matrix brain
23 chr1:223922800-223934800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
24 chr1:223923000-223931800 Weak transcription Brain Cingulate Gyrus brain
25 chr1:223925200-223934600 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
26 chr1:223925400-223930600 Weak transcription HUES6 Cell Line embryonic stem cell
27 chr1:223925400-223930800 Weak transcription Gastric stomach
28 chr1:223925400-223931800 Weak transcription Brain Inferior Temporal Lobe brain
29 chr1:223925400-223931800 Weak transcription Ovary ovary
30 chr1:223925400-223934800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
31 chr1:223926800-223930600 Weak transcription Pancreas Pancrea
32 chr1:223926800-223930800 Weak transcription Sigmoid Colon Sigmoid Colon
33 chr1:223926800-223931400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr1:223926800-223931600 Weak transcription Hela-S3 cervix
35 chr1:223926800-223932800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
36 chr1:223927400-223933000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr1:223927600-223931600 Weak transcription Brain Hippocampus Middle brain
38 chr1:223927800-223930600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr1:223927800-223930600 Weak transcription Fetal Lung lung
40 chr1:223927800-223931000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
41 chr1:223927800-223931600 Weak transcription Colon Smooth Muscle Colon
42 chr1:223927800-223935400 Strong transcription Breast Myoepithelial Primary Cells Breast
43 chr1:223928000-223930600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
44 chr1:223928000-223930600 Weak transcription Primary T helper cells PMA-I stimulated --
45 chr1:223928000-223930600 Weak transcription Cortex derived primary cultured neurospheres brain
46 chr1:223928000-223930600 Weak transcription Fetal Muscle Leg muscle
47 chr1:223928000-223930600 Weak transcription Right Ventricle heart
48 chr1:223928000-223930600 Weak transcription HSMMtube muscle
49 chr1:223928000-223930600 Weak transcription NHDF-Ad bronchial
50 chr1:223928000-223930600 Weak transcription NHLF lung

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Last update: Aug 31, 2015