Variant report

Variant	rs906911
Chromosome Location	chr11:109054299-109054300
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10502115	0.96[ASN][1000 genomes]
rs11212973	0.93[ASN][1000 genomes]
rs11213005	1.00[EUR][1000 genomes]
rs11213006	1.00[EUR][1000 genomes]
rs11500820	0.96[ASN][1000 genomes]
rs11501030	0.96[ASN][1000 genomes]
rs11501032	0.91[EUR][1000 genomes]
rs12278048	0.91[ASN][1000 genomes]
rs12278419	0.83[ASN][1000 genomes]
rs12280588	0.91[ASN][1000 genomes]
rs12281817	0.91[ASN][1000 genomes]
rs12282239	0.91[EUR][1000 genomes]
rs12286507	0.91[ASN][1000 genomes]
rs12286885	0.94[ASN][1000 genomes]
rs17109266	0.91[ASN][1000 genomes]
rs28493423	1.00[EUR][1000 genomes]
rs60455184	0.96[ASN][1000 genomes]
rs60529773	0.91[ASN][1000 genomes]
rs73549130	0.91[ASN][1000 genomes]
rs73549140	0.91[ASN][1000 genomes]
rs73549142	0.91[ASN][1000 genomes]
rs73549144	0.91[ASN][1000 genomes]
rs73549154	0.91[ASN][1000 genomes]
rs7940854	0.94[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1040650	chr11:108859584-109174553	Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:109054200-109055000	ZNF genes & repeats	ES-I3 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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