Variant report

Variant	rs919547
Chromosome Location	chr8:125627037-125627038
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:125624893..125627739-chr8:125639327..125643495,3	MCF-7	breast:
2	chr8:125550288..125552675-chr8:125626034..125628357,2	MCF-7	breast:
3	chr8:125623064..125627321-chr8:125629819..125632222,6	MCF-7	breast:
4	chr8:125617349..125622220-chr8:125623810..125627112,5	K562	blood:
5	chr8:125625138..125627927-chr8:125628466..125631300,2	K562	blood:
6	chr8:125625162..125628141-chr8:125641706..125644000,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000147687	Chromatin interaction
ENSG00000147684	Chromatin interaction
ENSG00000170873	Chromatin interaction

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs1023694	0.85[AMR][1000 genomes]
rs11780712	0.94[ASN][1000 genomes]
rs12545201	1.00[AFR][1000 genomes]
rs16893079	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16899847	0.85[AMR][1000 genomes]
rs16899858	0.95[AMR][1000 genomes]
rs16899867	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16899868	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16899870	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16899873	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs16899876	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs16899898	1.00[AFR][1000 genomes]
rs1978662	0.94[ASN][1000 genomes]
rs3750231	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4871521	0.92[ASN][1000 genomes]
rs934323	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:74 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:125614000-125628800	Enhancers	Liver	Liver
2	chr8:125614400-125627400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr8:125616000-125630200	Weak transcription	Rectal Smooth Muscle	rectum
4	chr8:125617600-125627400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr8:125617600-125631400	Enhancers	Skeletal Muscle Male	skeletal muscle
6	chr8:125617800-125628600	Enhancers	Primary B cells from peripheral blood	blood
7	chr8:125618000-125632800	Weak transcription	HUVEC	blood vessel
8	chr8:125618000-125640400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
9	chr8:125619200-125630800	Weak transcription	Rectal Mucosa Donor 31	rectum
10	chr8:125619200-125649000	Weak transcription	Colonic Mucosa	Colon
11	chr8:125619400-125627200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
12	chr8:125619400-125627200	Weak transcription	HepG2	liver
13	chr8:125619400-125628400	Weak transcription	Fetal Kidney	kidney
14	chr8:125621200-125627600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
15	chr8:125621800-125631400	Weak transcription	Esophagus	oesophagus
16	chr8:125623000-125627400	Weak transcription	Stomach Smooth Muscle	stomach
17	chr8:125623200-125628400	Weak transcription	Fetal Lung	lung
18	chr8:125623200-125630800	Weak transcription	Pancreas	Pancrea
19	chr8:125623200-125631600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
20	chr8:125623400-125630800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
21	chr8:125623600-125630400	Weak transcription	Gastric	stomach
22	chr8:125623800-125627200	Weak transcription	Lung	lung
23	chr8:125624200-125633800	Enhancers	Brain Hippocampus Middle	brain
24	chr8:125624600-125627200	Weak transcription	Right Atrium	heart
25	chr8:125624600-125627400	Weak transcription	Fetal Muscle Trunk	muscle
26	chr8:125624600-125629000	Weak transcription	HSMMtube	muscle
27	chr8:125624800-125628800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
28	chr8:125624800-125631200	Enhancers	Brain Germinal Matrix	brain
29	chr8:125624800-125633000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
30	chr8:125625000-125628200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
31	chr8:125625000-125628200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
32	chr8:125625000-125628600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
33	chr8:125625000-125629400	Weak transcription	Fetal Brain Male	brain
34	chr8:125625200-125634400	Weak transcription	Primary T helper cells fromperipheralblood	blood
35	chr8:125625400-125628200	Weak transcription	Right Ventricle	heart
36	chr8:125625400-125630600	Enhancers	Primary B cells from cord blood	blood
37	chr8:125625400-125632200	Weak transcription	Primary hematopoietic stem cells	blood
38	chr8:125625600-125627200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
39	chr8:125625600-125627600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
40	chr8:125625800-125627200	Weak transcription	Brain Inferior Temporal Lobe	brain
41	chr8:125625800-125627200	Weak transcription	Sigmoid Colon	Sigmoid Colon
42	chr8:125625800-125628600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
43	chr8:125626000-125627200	Weak transcription	Brain Anterior Caudate	brain
44	chr8:125626000-125627200	Weak transcription	Brain Substantia Nigra	brain
45	chr8:125626000-125627200	Weak transcription	Left Ventricle	heart
46	chr8:125626000-125627400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
47	chr8:125626000-125627400	Weak transcription	Cortex derived primary cultured neurospheres	brain
48	chr8:125626000-125627800	Enhancers	GM12878-XiMat	blood
49	chr8:125626000-125630800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
50	chr8:125626200-125627200	Weak transcription	Brain Angular Gyrus	brain

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