Variant report

Variant	rs9326485
Chromosome Location	chr11:76584653-76584654
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr11:76571845..76574548-chr11:76582598..76584984,4	K562	blood:
2	chr11:76571598..76573230-chr11:76583210..76585828,2	MCF-7	breast:
3	chr11:76576601..76578189-chr11:76583697..76586009,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000078124	Chromatin interaction

Extended variants
information (count: 230 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:229)

rs_ID	r²[population]
rs10082568	0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1025815	0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10431154	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10431181	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10431182	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10736811	0.81[EUR][1000 genomes]
rs10736812	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs10751262	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10751263	0.83[EUR][1000 genomes]
rs10751264	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10751267	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10751268	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10793201	0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10793204	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs10793205	0.93[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10793206	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10793207	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10793209	0.86[AMR][1000 genomes];0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10793210	0.84[ASN][1000 genomes]
rs10793211	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10793212	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10793213	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10793214	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10793215	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10793216	0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10793217	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10793218	0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10793219	0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10793220	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10793221	0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10793223	0.94[CEU][hapmap];0.87[JPT][hapmap]
rs10793227	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs10793229	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs10793230	1.00[CEU][hapmap];0.84[CHB][hapmap];0.82[JPT][hapmap]
rs10793231	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs10793232	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs10899292	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10899294	0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10899295	0.99[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10899297	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10899298	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10899301	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10899302	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10899303	0.80[EUR][1000 genomes]
rs10899305	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10899307	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10899308	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10899310	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10899311	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10899312	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10899313	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10899315	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10899316	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10899320	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10899321	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10899324	0.83[ASN][1000 genomes]
rs10899325	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10899327	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10899328	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10899329	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10899330	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10899332	0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10899340	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs10899341	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs10899344	0.89[CEU][hapmap];0.84[CHB][hapmap]
rs11236977	0.99[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11236999	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11237023	0.90[ASN][1000 genomes]
rs11237025	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11237027	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11237029	0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11237031	0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11237035	0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11533271	0.83[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs11535857	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11537264	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12222825	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12223659	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs12292156	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12718490	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12788158	0.88[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs12794575	0.94[CEU][hapmap];0.85[CHB][hapmap];0.89[JPT][hapmap];0.99[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12796913	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12807735	0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1356455	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1356456	0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1372045	0.88[CEU][hapmap]
rs1372046	0.94[CEU][hapmap];0.89[CHB][hapmap];0.89[JPT][hapmap];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1474087	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1517905	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1517906	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1517907	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs1517909	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs1589126	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs1607285	0.89[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1816748	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1907295	0.98[AMR][1000 genomes];0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1914599	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1914600	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1945083	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs1965151	0.93[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1980204	1.00[CEU][hapmap];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1980205	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.80[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1986000	0.96[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2043986	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2119456	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2119457	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2119458	0.82[EUR][1000 genomes]
rs2156770	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs2165404	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2203755	1.00[CEU][hapmap];0.95[CHB][hapmap];0.94[JPT][hapmap];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2372386	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2372388	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2826	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs3740765	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs3740767	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs3781697	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs3824889	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs4145048	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs4367972	0.86[ASN][1000 genomes]
rs4379869	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.80[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4457775	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4460836	1.00[CEU][hapmap];0.84[CHB][hapmap];0.81[JPT][hapmap]
rs4471450	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4479014	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4488228	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4488229	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4556574	0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4586198	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4604914	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4944128	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4944129	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4944132	1.00[CEU][hapmap]
rs4944134	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs4945115	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4945116	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4945118	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4945119	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4945124	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4945125	0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4945129	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs4945132	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs55956901	0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs56955124	0.98[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs591043	0.88[CEU][hapmap];0.84[CHB][hapmap]
rs603610	0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6592671	0.88[CEU][hapmap];0.95[CHB][hapmap];0.89[JPT][hapmap];0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6592672	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6592675	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6592676	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6592677	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6592678	0.85[EUR][1000 genomes]
rs6592679	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6592680	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6592682	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6592683	1.00[CEU][hapmap];0.89[CHB][hapmap];0.81[EUR][1000 genomes]
rs6592684	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6592685	0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6592687	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6592691	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs7101593	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7102485	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7103308	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7103500	1.00[CEU][hapmap];0.82[CHB][hapmap];0.82[EUR][1000 genomes]
rs7105895	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7106611	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7106625	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7110532	1.00[CEU][hapmap];0.89[CHB][hapmap]
rs7110849	0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7113282	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7113290	0.94[CEU][hapmap];0.94[CHB][hapmap];0.89[JPT][hapmap];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7114827	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7115092	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7116513	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7116800	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7116872	0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7117545	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7117682	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7118762	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7119361	1.00[CEU][hapmap];0.95[CHB][hapmap];0.94[JPT][hapmap];0.84[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7120215	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7121273	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs7122736	0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7123496	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs7123694	1.00[CEU][hapmap];0.85[CHB][hapmap]
rs7123723	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs7126666	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7127936	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs7128770	0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7129147	0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7924605	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7924613	0.93[CEU][hapmap]
rs7924888	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7925135	0.94[CEU][hapmap];0.83[CHB][hapmap]
rs7925652	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs7925774	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs7927367	1.00[CEU][hapmap];0.89[CHB][hapmap]
rs7927658	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7927731	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs7929837	0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7930307	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7931561	0.94[CEU][hapmap];0.95[CHB][hapmap];0.89[JPT][hapmap];0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7931646	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs7931869	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs7932288	0.94[CEU][hapmap];0.95[CHB][hapmap];0.89[JPT][hapmap];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7933248	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7933351	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7937883	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7940782	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs7942574	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7942646	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7943913	1.00[CEU][hapmap];0.84[CHB][hapmap];0.82[JPT][hapmap];0.83[ASN][1000 genomes]
rs7947809	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7949041	0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7951501	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs938809	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs938810	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs949339	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs949340	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs963704	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs963705	0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs964521	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9666315	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9666322	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9795148	0.82[ASN][1000 genomes]
rs9795229	0.85[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs9795281	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9795388	0.86[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs9795398	0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv518920	chr11:76573016-76637651	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:48 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:76572800-76596400	Weak transcription	Small Intestine	intestine
2	chr11:76573200-76591600	Weak transcription	Skeletal Muscle Male	skeletal muscle
3	chr11:76573200-76596600	Weak transcription	Right Ventricle	heart
4	chr11:76573200-76600400	Weak transcription	Primary T cells from cord blood	blood
5	chr11:76573200-76601400	Weak transcription	HUES64 Cell Line	embryonic stem cell
6	chr11:76573400-76591400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
7	chr11:76573600-76587600	Weak transcription	Hela-S3	cervix
8	chr11:76573600-76588600	Weak transcription	HUVEC	blood vessel
9	chr11:76573600-76591000	Weak transcription	NHDF-Ad	bronchial
10	chr11:76573600-76591400	Weak transcription	Left Ventricle	heart
11	chr11:76573800-76591000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr11:76574200-76599800	Weak transcription	Duodenum Mucosa	Duodenum
13	chr11:76575400-76588400	Weak transcription	Rectal Mucosa Donor 31	rectum
14	chr11:76579400-76595400	Weak transcription	HMEC	breast
15	chr11:76580000-76587200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
16	chr11:76580000-76594800	Weak transcription	NHEK	skin
17	chr11:76580000-76596800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
18	chr11:76580200-76585200	Weak transcription	Aorta	Aorta
19	chr11:76580200-76587200	Weak transcription	Brain Hippocampus Middle	brain
20	chr11:76580200-76591400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
21	chr11:76580200-76595000	Weak transcription	Brain Angular Gyrus	brain
22	chr11:76580200-76596400	Weak transcription	Lung	lung
23	chr11:76580400-76587200	Weak transcription	Brain Inferior Temporal Lobe	brain
24	chr11:76580400-76587800	Weak transcription	GM12878-XiMat	blood
25	chr11:76580400-76588200	Weak transcription	Brain Substantia Nigra	brain
26	chr11:76580400-76596600	Weak transcription	Sigmoid Colon	Sigmoid Colon
27	chr11:76580600-76588200	Weak transcription	Brain Cingulate Gyrus	brain
28	chr11:76580600-76591200	Weak transcription	Cortex derived primary cultured neurospheres	brain
29	chr11:76580600-76591200	Weak transcription	Adipose Nuclei	Adipose
30	chr11:76580800-76596400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
31	chr11:76581000-76585600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
32	chr11:76581000-76591200	Weak transcription	Brain Germinal Matrix	brain
33	chr11:76581000-76602200	Weak transcription	Primary B cells from cord blood	blood
34	chr11:76581200-76590600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
35	chr11:76581200-76595000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
36	chr11:76581200-76613400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
37	chr11:76581400-76585200	Weak transcription	Primary neutrophils fromperipheralblood	blood
38	chr11:76581400-76587400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
39	chr11:76581400-76590400	Weak transcription	Brain Anterior Caudate	brain
40	chr11:76581400-76591400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
41	chr11:76581400-76591400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
42	chr11:76581400-76591400	Weak transcription	Placenta	Placenta
43	chr11:76581600-76588600	Weak transcription	Rectal Mucosa Donor 29	rectum
44	chr11:76581600-76594600	Weak transcription	Primary monocytes fromperipheralblood	blood
45	chr11:76581600-76595000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
46	chr11:76581600-76600000	Weak transcription	Fetal Intestine Small	intestine
47	chr11:76581800-76600200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
48	chr11:76582200-76595000	Weak transcription	Monocytes-CD14+_RO01746	blood

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