Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs13193052	0.85[EUR][1000 genomes]
rs1358880	0.86[ASN][1000 genomes]
rs2635109	0.80[ASN][1000 genomes]
rs2756333	0.80[ASN][1000 genomes]
rs2756336	0.80[ASN][1000 genomes]
rs278318	0.80[ASN][1000 genomes]
rs4706582	0.81[EUR][1000 genomes]
rs508269	0.80[ASN][1000 genomes]
rs515393	0.80[ASN][1000 genomes]
rs526770	0.80[ASN][1000 genomes]
rs527658	0.80[ASN][1000 genomes]
rs594174	0.80[ASN][1000 genomes]
rs67813921	0.85[EUR][1000 genomes]
rs694723	0.80[ASN][1000 genomes]
rs7744739	0.81[EUR][1000 genomes]
rs795855	0.80[ASN][1000 genomes]
rs9343154	0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9343160	0.83[ASN][1000 genomes]
rs9352110	0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9352111	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9352116	0.81[EUR][1000 genomes]
rs9352121	0.82[ASN][1000 genomes]
rs9360788	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758061	chr6:74961996-75128165	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	esv2759442	chr6:74961996-75162222	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	esv35015	chr6:75031337-75154143	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	esv2757178	chr6:75060947-75162222	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
5	nsv886166	chr6:75082067-75155303	Enhancers Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
6	nsv886167	chr6:75102625-75175449	Enhancers Weak transcription Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
7	nsv886168	chr6:75112715-75166715	Enhancers Weak transcription Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:75114400-75119400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

Quick Search: