Variant report

Variant	rs9350843
Chromosome Location	chr6:80779651-80779652
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10943681	0.91[CEU][hapmap];0.88[EUR][1000 genomes]
rs10943682	0.84[EUR][1000 genomes]
rs10943688	0.91[CEU][hapmap];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs12526265	0.88[EUR][1000 genomes]
rs1410521	0.91[CEU][hapmap];0.87[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1410522	0.91[CEU][hapmap];0.87[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1897870	0.91[CEU][hapmap];0.88[EUR][1000 genomes]
rs1927425	0.89[EUR][1000 genomes]
rs1927426	0.89[EUR][1000 genomes]
rs2149082	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2181070	0.89[EUR][1000 genomes]
rs2295838	0.91[CEU][hapmap];0.88[EUR][1000 genomes]
rs2295840	0.88[EUR][1000 genomes]
rs2295841	0.91[CEU][hapmap];0.90[EUR][1000 genomes]
rs3799497	0.91[CEU][hapmap];0.88[EUR][1000 genomes]
rs3812151	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs3828761	0.96[ASN][1000 genomes]
rs3967160	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4706827	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs6923330	1.00[CHB][hapmap];0.93[JPT][hapmap];0.96[ASN][1000 genomes]
rs9294168	0.88[EUR][1000 genomes]
rs9341801	0.91[CEU][hapmap];0.88[EUR][1000 genomes]
rs9341802	0.82[EUR][1000 genomes]
rs9341803	0.90[EUR][1000 genomes]
rs9343961	0.84[EUR][1000 genomes]
rs9343965	0.89[EUR][1000 genomes]
rs9352790	0.90[EUR][1000 genomes]
rs9352797	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs9359406	0.90[EUR][1000 genomes]
rs9448880	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9448881	0.84[CHB][hapmap];0.93[JPT][hapmap];0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv970144	chr6:80775545-80779779	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:80764800-80784400	Weak transcription	Thymus	Thymus

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links