Variant report

Variant	rs9357849
Chromosome Location	chr6:55092069-55092070
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 43 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:42)

rs_ID	r²[population]
rs12055777	0.99[ASN][1000 genomes]
rs12055778	0.99[ASN][1000 genomes]
rs3122164	0.86[YRI][hapmap]
rs3134711	0.98[EUR][1000 genomes]
rs4074181	0.95[ASN][1000 genomes]
rs4075174	0.85[ASN][1000 genomes]
rs4311511	0.96[YRI][hapmap]
rs4311512	1.00[CEU][hapmap];1.00[CHB][hapmap]
rs4631286	1.00[CHB][hapmap];1.00[YRI][hapmap]
rs56843381	0.99[ASN][1000 genomes]
rs62416801	0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62416821	0.95[ASN][1000 genomes]
rs6930360	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7741664	0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9349771	0.99[ASN][1000 genomes]
rs9349772	0.81[YRI][hapmap];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9349773	0.95[ASN][1000 genomes]
rs9349774	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9357850	0.99[ASN][1000 genomes]
rs9357851	0.99[ASN][1000 genomes]
rs9357852	0.97[ASN][1000 genomes]
rs9357853	0.84[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9357854	0.95[ASN][1000 genomes]
rs9357855	0.95[ASN][1000 genomes]
rs9367624	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap]
rs9367625	0.96[ASN][1000 genomes]
rs9367626	0.95[ASN][1000 genomes]
rs9367627	0.95[ASN][1000 genomes]
rs9370407	0.95[ASN][1000 genomes]
rs9382470	0.80[ASN][1000 genomes]
rs9382471	0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9382472	0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9396069	0.81[YRI][hapmap];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9396070	0.99[ASN][1000 genomes]
rs9396074	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9396075	0.95[ASN][1000 genomes]
rs9464215	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9475206	0.86[CEU][hapmap];0.84[YRI][hapmap]
rs9475208	0.82[YRI][hapmap]
rs9475210	0.83[YRI][hapmap]
rs9475211	0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9475214	0.81[YRI][hapmap];0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1016461	chr6:55038131-55129663	Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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