Variant report

Variant	rs9371467
Chromosome Location	chr6:151002593-151002594
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:150999388..151001415-chr6:151001884..151004556,2	K562	blood:
2	chr6:151002149..151004353-chr6:151006799..151008917,2	MCF-7	breast:

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs7738394	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7748613	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7749222	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv886772	chr6:150743364-151024280	Enhancers Active TSS Weak transcription Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv1030326	chr6:150967665-151641372	Strong transcription Weak transcription Enhancers Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:34 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:150975600-151002800	Weak transcription	Fetal Muscle Trunk	muscle
2	chr6:150980600-151008800	Weak transcription	Gastric	stomach
3	chr6:150980800-151014800	Weak transcription	Pancreas	Pancrea
4	chr6:150987600-151002800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr6:150989400-151007800	Weak transcription	Ovary	ovary
6	chr6:150990400-151003200	Weak transcription	Left Ventricle	heart
7	chr6:150990600-151002800	Weak transcription	Fetal Muscle Leg	muscle
8	chr6:150990600-151008800	Weak transcription	Rectal Smooth Muscle	rectum
9	chr6:150990600-151016600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
10	chr6:150990800-151003200	Weak transcription	Adipose Nuclei	Adipose
11	chr6:150990800-151011800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr6:150995000-151008800	Weak transcription	Duodenum Smooth Muscle	Duodenum
13	chr6:150995200-151003000	Weak transcription	Esophagus	oesophagus
14	chr6:150995200-151003400	Weak transcription	Placenta	Placenta
15	chr6:150995400-151005400	Weak transcription	Rectal Mucosa Donor 31	rectum
16	chr6:150995400-151008800	Weak transcription	Small Intestine	intestine
17	chr6:150995600-151006000	Weak transcription	Rectal Mucosa Donor 29	rectum
18	chr6:150995600-151006200	Weak transcription	Duodenum Mucosa	Duodenum
19	chr6:150996200-151003600	Weak transcription	Sigmoid Colon	Sigmoid Colon
20	chr6:150996600-151008000	Weak transcription	Fetal Intestine Large	intestine
21	chr6:150998200-151003400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
22	chr6:150998200-151006000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
23	chr6:150998800-151003400	Weak transcription	Fetal Intestine Small	intestine
24	chr6:150999000-151003000	Weak transcription	Fetal Stomach	stomach
25	chr6:151000600-151002800	Enhancers	Primary B cells from cord blood	blood
26	chr6:151000800-151010000	Enhancers	Primary B cells from peripheral blood	blood
27	chr6:151001000-151006600	Enhancers	Spleen	Spleen
28	chr6:151001200-151003000	Weak transcription	Lung	lung
29	chr6:151001200-151003400	Enhancers	Thymus	Thymus
30	chr6:151001600-151008200	Genic enhancers	Fetal Thymus	thymus
31	chr6:151002200-151002600	Weak transcription	Fetal Kidney	kidney
32	chr6:151002200-151005000	Enhancers	Breast Myoepithelial Primary Cells	Breast
33	chr6:151002400-151004200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
34	chr6:151002400-151007800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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