Variant report

Variant rs940389
Chromosome Location chr2:48808152-48808153
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:48759000-48827600 Weak transcription Muscle Satellite Cultured Cells --
2 chr2:48773000-48808800 Weak transcription Right Ventricle heart
3 chr2:48788600-48812000 Weak transcription iPS-15b Cell Line embryonic stem cell
4 chr2:48794400-48812000 Weak transcription H1 Cell Line embryonic stem cell
5 chr2:48794400-48827200 Weak transcription NHDF-Ad bronchial
6 chr2:48794600-48811200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
7 chr2:48795400-48812000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr2:48795400-48814200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr2:48795600-48826000 Weak transcription Fetal Intestine Small intestine
10 chr2:48798800-48815600 Weak transcription Rectal Smooth Muscle rectum
11 chr2:48799000-48825800 Weak transcription HSMMtube muscle
12 chr2:48800000-48812000 Weak transcription HUES64 Cell Line embryonic stem cell
13 chr2:48800400-48811800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr2:48800400-48812600 Weak transcription Brain Hippocampus Middle brain
15 chr2:48800400-48813400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr2:48800400-48814000 Weak transcription Lung lung
17 chr2:48800600-48811600 Weak transcription Placenta Amnion Placenta Amnion
18 chr2:48800600-48811800 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr2:48800800-48812800 Weak transcription Brain Germinal Matrix brain
20 chr2:48801600-48810200 Weak transcription Placenta Placenta
21 chr2:48803400-48812000 Weak transcription H9 Cell Line embryonic stem cell
22 chr2:48804600-48824600 Weak transcription Fetal Intestine Large intestine
23 chr2:48804800-48816200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
24 chr2:48806600-48811800 Weak transcription iPS-20b Cell Line embryonic stem cell
25 chr2:48807600-48813600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr2:48807800-48808200 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
27 chr2:48807800-48808200 Strong transcription HUES6 Cell Line embryonic stem cell
28 chr2:48807800-48808400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr2:48807800-48808400 Strong transcription Fetal Adrenal Gland Adrenal Gland
30 chr2:48807800-48808600 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr2:48807800-48808600 Strong transcription Psoas Muscle Psoas
32 chr2:48807800-48808800 Strong transcription Adipose Nuclei Adipose
33 chr2:48807800-48809000 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
34 chr2:48807800-48809000 Genic enhancers Colon Smooth Muscle Colon
35 chr2:48807800-48809000 Strong transcription Left Ventricle heart
36 chr2:48807800-48809600 Strong transcription Aorta Aorta
37 chr2:48807800-48809600 Strong transcription Fetal Lung lung
38 chr2:48807800-48809600 Strong transcription Fetal Muscle Trunk muscle
39 chr2:48807800-48809600 Strong transcription Ovary ovary
40 chr2:48807800-48809800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr2:48807800-48810200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr2:48807800-48810600 Strong transcription Fetal Muscle Leg muscle
43 chr2:48807800-48812800 Strong transcription Stomach Smooth Muscle stomach
44 chr2:48807800-48814200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr2:48807800-48815200 Strong transcription Fetal Stomach stomach
46 chr2:48807800-48815400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr2:48808000-48808400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
48 chr2:48808000-48808600 Genic enhancers Fetal Kidney kidney
49 chr2:48808000-48809800 Strong transcription Breast Myoepithelial Primary Cells Breast
50 chr2:48808000-48810600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

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