Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11156747	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11622937	1.00[ASN][1000 genomes]
rs11623071	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12100892	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12100893	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12881167	1.00[ASN][1000 genomes]
rs12882489	1.00[ASN][1000 genomes]
rs12886529	1.00[ASN][1000 genomes]
rs12886735	0.86[ASN][1000 genomes]
rs12894356	0.93[ASN][1000 genomes]
rs17410904	1.00[ASN][1000 genomes]
rs1951187	0.88[CEU][hapmap];0.87[TSI][hapmap];1.00[ASN][1000 genomes]
rs1957025	0.84[ASW][hapmap];0.96[CEU][hapmap];0.86[CHB][hapmap];0.88[CHD][hapmap];1.00[JPT][hapmap];0.81[MKK][hapmap];0.95[TSI][hapmap];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1957026	0.92[CEU][hapmap];0.95[TSI][hapmap];0.97[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2383304	1.00[ASN][1000 genomes]
rs34757755	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34976846	1.00[ASN][1000 genomes]
rs35901369	0.99[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs61981143	1.00[ASN][1000 genomes]
rs941745	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758352	chr14:32858480-33016442	Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	esv2759978	chr14:32858480-33016442	Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv901595	chr14:32928634-32961434	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:32920800-32930200	Weak transcription	Cortex derived primary cultured neurospheres	brain
2	chr14:32923800-32929600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr14:32923800-32929600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
4	chr14:32923800-32936400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr14:32926800-32936800	Weak transcription	Brain Cingulate Gyrus	brain
6	chr14:32927000-32929600	Weak transcription	Aorta	Aorta
7	chr14:32927200-32929800	Weak transcription	Stomach Smooth Muscle	stomach
8	chr14:32928200-32929400	Weak transcription	Fetal Heart	heart
9	chr14:32928400-32929600	Weak transcription	Placenta Amnion	Placenta Amnion
10	chr14:32928600-32929600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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