Variant report

Variant	rs9478551
Chromosome Location	chr6:150503093-150503094
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:150494832..150497626-chr6:150501438..150503666,2	K562	blood:
2	chr6:150502431..150505236-chr6:150510724..150512561,2	K562	blood:
3	chr6:150500271..150503128-chr6:150513196..150516090,3	MCF-7	breast:

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs11155709	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11155710	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11751046	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11755697	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11759065	0.83[EUR][1000 genomes]
rs12195287	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17079397	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9397194	0.81[EUR][1000 genomes]
rs9397725	0.84[EUR][1000 genomes]

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:150491400-150506400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chr6:150497800-150511000	Weak transcription	NHEK	skin
3	chr6:150499600-150503600	Weak transcription	Sigmoid Colon	Sigmoid Colon
4	chr6:150499600-150504600	Weak transcription	Colonic Mucosa	Colon
5	chr6:150499600-150505200	Weak transcription	Right Ventricle	heart
6	chr6:150499600-150506000	Weak transcription	Skeletal Muscle Female	skeletal muscle
7	chr6:150499600-150519600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
8	chr6:150499800-150503400	Weak transcription	Rectal Mucosa Donor 29	rectum
9	chr6:150500000-150508000	Enhancers	Fetal Heart	heart
10	chr6:150500200-150503600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
11	chr6:150501800-150503400	Enhancers	Fetal Brain Male	brain
12	chr6:150502000-150503600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
13	chr6:150502000-150503600	Weak transcription	Rectal Mucosa Donor 31	rectum
14	chr6:150502000-150503800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
15	chr6:150502000-150506400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
16	chr6:150502000-150506400	Weak transcription	Esophagus	oesophagus
17	chr6:150502000-150506400	Weak transcription	HMEC	breast
18	chr6:150502200-150503800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
19	chr6:150502400-150505200	Weak transcription	Left Ventricle	heart
20	chr6:150502400-150505400	Weak transcription	K562	blood
21	chr6:150502400-150511800	Weak transcription	Right Atrium	heart
22	chr6:150502600-150503600	Weak transcription	Psoas Muscle	Psoas
23	chr6:150502600-150504800	Enhancers	Pancreatic Islets	Pancreatic Islet

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