Variant report

Variant	rs9480463
Chromosome Location	chr6:150807661-150807662
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs11752980	0.85[ASN][1000 genomes]
rs35512316	0.85[ASN][1000 genomes]
rs4367393	0.94[ASN][1000 genomes]
rs67032163	0.83[ASN][1000 genomes]
rs9383827	0.82[ASN][1000 genomes]
rs9397322	0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1020067	chr6:150730783-150870708	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv886772	chr6:150743364-151024280	Enhancers Active TSS Weak transcription Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:150806400-150808200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr6:150806400-150808200	Enhancers	Adipose Nuclei	Adipose
3	chr6:150806400-150808200	Enhancers	Liver	Liver
4	chr6:150806400-150808200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
5	chr6:150806600-150807800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chr6:150806600-150808000	Enhancers	Skeletal Muscle Male	skeletal muscle
7	chr6:150807000-150807800	Weak transcription	Fetal Muscle Leg	muscle
8	chr6:150807200-150807800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr6:150807200-150808000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr6:150807400-150808000	Enhancers	Spleen	Spleen
11	chr6:150807400-150808000	Enhancers	HUVEC	blood vessel
12	chr6:150807400-150808200	Enhancers	Fetal Thymus	thymus
13	chr6:150807600-150808000	Enhancers	Brain Anterior Caudate	brain
14	chr6:150807600-150808000	Enhancers	Skeletal Muscle Female	skeletal muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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