Variant report

Variant	rs9526717
Chromosome Location	chr13:51632632-51632633
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11148205	1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[ASN][1000 genomes]
rs11842080	1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs12859216	0.94[CHB][hapmap];0.87[JPT][hapmap];0.87[ASN][1000 genomes]
rs12865698	0.81[ASN][1000 genomes]
rs12871332	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs12877403	0.94[CHB][hapmap];0.87[JPT][hapmap];0.87[ASN][1000 genomes]
rs3790015	0.94[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs3790017	0.91[ASN][1000 genomes]
rs3803198	1.00[CHB][hapmap];0.84[CHD][hapmap];1.00[JPT][hapmap]
rs3803199	1.00[CHB][hapmap];0.84[CHD][hapmap];1.00[JPT][hapmap]
rs3803200	1.00[CHB][hapmap];0.84[CHD][hapmap];1.00[JPT][hapmap]
rs4606607	0.80[ASN][1000 genomes]
rs913467	0.88[CHB][hapmap]
rs927992	0.93[CHB][hapmap];0.85[JPT][hapmap];0.86[ASN][1000 genomes]
rs9563015	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs9563017	0.81[ASN][1000 genomes]
rs9563018	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9568502	1.00[CHB][hapmap];0.84[CHD][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs9568503	1.00[CHB][hapmap];0.84[CHD][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs9568504	0.82[ASN][1000 genomes]

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:51629000-51634200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
2	chr13:51629200-51634400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr13:51631000-51634600	Enhancers	Primary hematopoietic stem cells	blood
4	chr13:51631800-51634000	Enhancers	Primary hematopoietic stem cells short term culture	blood
5	chr13:51632200-51633000	Weak transcription	Fetal Muscle Leg	muscle
6	chr13:51632200-51633200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr13:51632200-51633200	Enhancers	HUES48 Cell Line	embryonic stem cell
8	chr13:51632200-51633200	Enhancers	HUES6 Cell Line	embryonic stem cell
9	chr13:51632200-51633600	Enhancers	HUES64 Cell Line	embryonic stem cell
10	chr13:51632200-51633800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr13:51632200-51634000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
12	chr13:51632200-51634200	Enhancers	Cortex derived primary cultured neurospheres	brain
13	chr13:51632400-51633200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
14	chr13:51632400-51633400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
15	chr13:51632400-51633600	Enhancers	iPS-18 Cell Line	embryonic stem cell
16	chr13:51632600-51632800	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
17	chr13:51632600-51632800	Enhancers	Spleen	Spleen
18	chr13:51632600-51633200	Enhancers	H9 Cell Line	embryonic stem cell
19	chr13:51632600-51633200	Enhancers	iPS-15b Cell Line	embryonic stem cell
20	chr13:51632600-51633400	Enhancers	ES-I3 Cell Line	embryonic stem cell
21	chr13:51632600-51633400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
22	chr13:51632600-51633400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
23	chr13:51632600-51633400	Enhancers	Fetal Heart	heart
24	chr13:51632600-51633400	Enhancers	Fetal Lung	lung
25	chr13:51632600-51639800	Enhancers	Brain Germinal Matrix	brain

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