Variant report

Variant	rs9550431
Chromosome Location	chr13:29569052-29569053
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs1040913	0.89[ASN][1000 genomes]
rs1322377	0.89[ASN][1000 genomes]
rs3858735	0.82[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs3895286	0.83[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs4768992	0.82[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs7987203	0.89[ASN][1000 genomes]
rs7996516	0.85[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs8001072	0.85[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs9506070	0.82[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs9508222	0.82[AMR][1000 genomes];0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533835	chr13:29141132-29962069	Weak transcription Strong transcription Flanking Active TSS Bivalent/Poised TSS Enhancers Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:29566800-29574400	Weak transcription	Fetal Heart	heart

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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