The 2.0 version of rSNPBase

Variant report

Variant rs9561954
Chromosome Location chr13:96436146-96436147
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:96394400-96438400 Weak transcription Primary T killer naive cells fromperipheralblood blood
2 chr13:96398400-96436200 Weak transcription Colon Smooth Muscle Colon
3 chr13:96398400-96439400 Weak transcription Brain Hippocampus Middle brain
4 chr13:96404000-96439400 Weak transcription Thymus Thymus
5 chr13:96405400-96436800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr13:96405400-96439400 Weak transcription Brain Cingulate Gyrus brain
7 chr13:96405400-96452600 Weak transcription Psoas Muscle Psoas
8 chr13:96405600-96455800 Weak transcription Fetal Heart heart
9 chr13:96407200-96439400 Weak transcription Brain Anterior Caudate brain
10 chr13:96408400-96443600 Weak transcription iPS-20b Cell Line embryonic stem cell
11 chr13:96408600-96443200 Weak transcription HUES48 Cell Line embryonic stem cell
12 chr13:96408600-96445400 Weak transcription K562 blood
13 chr13:96410400-96436200 Weak transcription Aorta Aorta
14 chr13:96411400-96439400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
15 chr13:96412000-96443400 Weak transcription Colonic Mucosa Colon
16 chr13:96413200-96439800 Weak transcription Cortex derived primary cultured neurospheres brain
17 chr13:96414000-96436600 Weak transcription Rectal Smooth Muscle rectum
18 chr13:96414000-96443400 Weak transcription Brain Angular Gyrus brain
19 chr13:96414400-96443400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
20 chr13:96415600-96439400 Weak transcription Brain Inferior Temporal Lobe brain
21 chr13:96416200-96436400 Weak transcription HSMMtube muscle
22 chr13:96416200-96439200 Weak transcription Brain Substantia Nigra brain
23 chr13:96416200-96439200 Weak transcription Fetal Muscle Trunk muscle
24 chr13:96416200-96443400 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr13:96416200-96445400 Weak transcription Fetal Kidney kidney
26 chr13:96416400-96440000 Weak transcription HUES6 Cell Line embryonic stem cell
27 chr13:96416400-96440200 Weak transcription HepG2 liver
28 chr13:96416800-96436200 Weak transcription Placenta Placenta
29 chr13:96417600-96438400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
30 chr13:96417600-96439400 Weak transcription HUES64 Cell Line embryonic stem cell
31 chr13:96417600-96439400 Weak transcription Skeletal Muscle Female skeletal muscle
32 chr13:96418800-96436200 Weak transcription HMEC breast
33 chr13:96422200-96440600 Weak transcription Fetal Lung lung
34 chr13:96422400-96439400 Weak transcription Small Intestine intestine
35 chr13:96423800-96439600 Weak transcription Esophagus oesophagus
36 chr13:96429400-96438000 Weak transcription Primary B cells from peripheral blood blood
37 chr13:96429600-96444200 Weak transcription Primary T killer memory cells from peripheral blood blood
38 chr13:96430000-96457400 Weak transcription Brain Germinal Matrix brain
39 chr13:96430800-96436200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr13:96431000-96436200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr13:96431000-96438400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr13:96431000-96439400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr13:96431200-96436400 Weak transcription Duodenum Smooth Muscle Duodenum
44 chr13:96431600-96442400 Weak transcription Fetal Brain Female brain
45 chr13:96432400-96443000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
46 chr13:96432600-96436200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr13:96432800-96436600 Weak transcription Stomach Smooth Muscle stomach
48 chr13:96433000-96453000 Weak transcription Pancreatic Islets Pancreatic Islet
49 chr13:96433400-96436200 Weak transcription Primary T cells fromperipheralblood blood
50 chr13:96433600-96436400 Weak transcription Stomach Mucosa stomach

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015