Variant report

Variant	rs9568611
Chromosome Location	chr13:52075038-52075039
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs2277445	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2408364	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs3930275	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7325241	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7991492	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7992256	0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9526753	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs9526762	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9526767	0.85[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9526770	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9535666	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9535695	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:52070600-52075800	Weak transcription	HSMMtube	muscle
2	chr13:52072000-52075400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr13:52074000-52076000	Enhancers	Liver	Liver
4	chr13:52074200-52076000	Enhancers	Pancreas	Pancrea
5	chr13:52074400-52076200	Enhancers	HepG2	liver
6	chr13:52074400-52076400	Enhancers	GM12878-XiMat	blood
7	chr13:52075000-52076800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
8	chr13:52075000-52076800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
9	chr13:52075000-52076800	Enhancers	Osteobl	bone
10	chr13:52075000-52077000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr13:52075000-52077000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr13:52075000-52077000	Enhancers	Primary monocytes fromperipheralblood	blood
13	chr13:52075000-52077000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
14	chr13:52075000-52077000	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
15	chr13:52075000-52077000	Enhancers	Monocytes-CD14+_RO01746	blood
16	chr13:52075000-52077000	Enhancers	NHDF-Ad	bronchial

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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