The 2.0 version of rSNPBase

Variant report

Variant rs9590335
Chromosome Location chr13:96481368-96481369
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:96444400-96485600 Weak transcription NHDF-Ad bronchial
2 chr13:96445800-96490000 Weak transcription HepG2 liver
3 chr13:96452000-96490600 Weak transcription Fetal Kidney kidney
4 chr13:96462600-96485600 Weak transcription Hela-S3 cervix
5 chr13:96466200-96481400 Weak transcription Skeletal Muscle Female skeletal muscle
6 chr13:96466400-96485400 Weak transcription NHEK skin
7 chr13:96466400-96486000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr13:96466600-96485800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr13:96466800-96485800 Weak transcription Brain Anterior Caudate brain
10 chr13:96467000-96485200 Weak transcription HUVEC blood vessel
11 chr13:96467400-96490800 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr13:96468200-96489800 Weak transcription GM12878-XiMat blood
13 chr13:96468800-96486000 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr13:96475800-96485600 Weak transcription HMEC breast
15 chr13:96476000-96502600 Weak transcription Fetal Heart heart
16 chr13:96476400-96489800 Weak transcription HUES48 Cell Line embryonic stem cell
17 chr13:96477400-96486000 Weak transcription HUES64 Cell Line embryonic stem cell
18 chr13:96478000-96485400 Weak transcription A549 lung
19 chr13:96478000-96485600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr13:96478000-96485600 Weak transcription Brain Cingulate Gyrus brain
21 chr13:96478000-96486000 Weak transcription Primary hematopoietic stem cells short term culture blood
22 chr13:96478000-96486000 Weak transcription Adipose Nuclei Adipose
23 chr13:96478000-96498200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr13:96478000-96502600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr13:96478000-96502600 Weak transcription Left Ventricle heart
26 chr13:96478000-96568400 Weak transcription Placenta Placenta
27 chr13:96478200-96481800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr13:96478200-96481800 Weak transcription Fetal Lung lung
29 chr13:96478200-96482400 Weak transcription Pancreas Pancrea
30 chr13:96478200-96483000 Weak transcription Duodenum Mucosa Duodenum
31 chr13:96478200-96485200 Weak transcription Muscle Satellite Cultured Cells --
32 chr13:96478200-96485400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr13:96478200-96485600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr13:96478200-96485600 Weak transcription Cortex derived primary cultured neurospheres brain
35 chr13:96478200-96485600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr13:96478200-96485600 Weak transcription NHLF lung
37 chr13:96478200-96485600 Weak transcription Osteobl bone
38 chr13:96478200-96485800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr13:96478200-96485800 Weak transcription NH-A brain
40 chr13:96478200-96486000 Weak transcription iPS-20b Cell Line embryonic stem cell
41 chr13:96478200-96486000 Weak transcription Brain Inferior Temporal Lobe brain
42 chr13:96478200-96486000 Weak transcription Fetal Adrenal Gland Adrenal Gland
43 chr13:96478200-96486400 Weak transcription Primary monocytes fromperipheralblood blood
44 chr13:96478200-96489200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr13:96478200-96489800 Weak transcription Fetal Intestine Large intestine
46 chr13:96478200-96489800 Weak transcription Fetal Muscle Leg muscle
47 chr13:96478200-96490000 Weak transcription Brain Hippocampus Middle brain
48 chr13:96478200-96490400 Weak transcription HUES6 Cell Line embryonic stem cell
49 chr13:96478200-96490400 Weak transcription Liver Liver
50 chr13:96478200-96490600 Weak transcription Fetal Muscle Trunk muscle

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Last update: Aug 31, 2015