The 2.0 version of rSNPBase

Variant report

Variant rs9593129
Chromosome Location chr13:76386867-76386868
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:76361600-76397800 Weak transcription Duodenum Smooth Muscle Duodenum
2 chr13:76367000-76387000 Weak transcription Ovary ovary
3 chr13:76370400-76415600 Weak transcription Primary B cells from cord blood blood
4 chr13:76373000-76414600 Weak transcription HMEC breast
5 chr13:76373400-76387200 Weak transcription Psoas Muscle Psoas
6 chr13:76376800-76415400 Weak transcription Stomach Smooth Muscle stomach
7 chr13:76377400-76395000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
8 chr13:76377600-76387000 Weak transcription Brain Germinal Matrix brain
9 chr13:76377600-76387200 Weak transcription Spleen Spleen
10 chr13:76377600-76395200 Weak transcription GM12878-XiMat blood
11 chr13:76377600-76398600 Weak transcription Primary B cells from peripheral blood blood
12 chr13:76377600-76415800 Weak transcription Dnd41 blood
13 chr13:76377600-76416200 Weak transcription A549 lung
14 chr13:76378200-76397800 Weak transcription Primary T helper cells fromperipheralblood blood
15 chr13:76378200-76415800 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chr13:76378400-76392200 Weak transcription Primary T helper naive cells fromperipheralblood blood
17 chr13:76378400-76415600 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr13:76378800-76387000 Strong transcription HSMM muscle
19 chr13:76378800-76393200 Weak transcription Primary T helper cells PMA-I stimulated --
20 chr13:76379200-76394800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr13:76380400-76387200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr13:76380600-76387000 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr13:76380600-76387200 Weak transcription Pancreas Pancrea
24 chr13:76380600-76387400 Weak transcription Gastric stomach
25 chr13:76380600-76388600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
26 chr13:76380600-76395200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr13:76380600-76397800 Weak transcription Colonic Mucosa Colon
28 chr13:76380600-76397800 Weak transcription Fetal Muscle Trunk muscle
29 chr13:76380600-76398000 Weak transcription Rectal Smooth Muscle rectum
30 chr13:76380600-76400400 Weak transcription Esophagus oesophagus
31 chr13:76380600-76405600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr13:76380800-76391200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr13:76380800-76392800 Weak transcription Primary T cells fromperipheralblood blood
34 chr13:76380800-76397800 Weak transcription Brain Anterior Caudate brain
35 chr13:76381000-76392400 Weak transcription Duodenum Mucosa Duodenum
36 chr13:76382400-76387200 Weak transcription Lung lung
37 chr13:76382400-76387600 Weak transcription Sigmoid Colon Sigmoid Colon
38 chr13:76382400-76388400 Weak transcription Fetal Muscle Leg muscle
39 chr13:76382400-76391000 Weak transcription Liver Liver
40 chr13:76382400-76392400 Weak transcription Breast Myoepithelial Primary Cells Breast
41 chr13:76382400-76392400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr13:76382400-76392400 Weak transcription NHLF lung
43 chr13:76382600-76387000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr13:76382600-76387000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
45 chr13:76382600-76387400 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr13:76382600-76387600 Weak transcription Left Ventricle heart
47 chr13:76382600-76392400 Weak transcription Fetal Intestine Small intestine
48 chr13:76382800-76391400 Weak transcription Rectal Mucosa Donor 29 rectum
49 chr13:76383200-76387400 Weak transcription Right Ventricle heart
50 chr13:76383200-76391400 Weak transcription NH-A brain

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Last update: Aug 31, 2015