Variant report

Variant	rs9655774
Chromosome Location	chr7:101755060-101755061
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr7:101750174..101752754-chr7:101753399..101756546,3	MCF-7	breast:
2	chr7:101751781..101754172-chr7:101754915..101757443,3	K562	blood:
3	chr7:101752221..101755453-chr7:101756751..101759873,4	K562	blood:
4	chr7:101754295..101756100-chr7:101760007..101761517,2	MCF-7	breast:

Extended variants
information (count: 44 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:44)

rs_ID	r²[population]
rs10231704	1.00[CHB][hapmap]
rs10243429	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10245459	1.00[CHB][hapmap]
rs10246310	1.00[CHB][hapmap]
rs10249739	1.00[CHB][hapmap]
rs10252737	1.00[CHB][hapmap]
rs10259603	1.00[CHB][hapmap]
rs10259857	0.96[CEU][hapmap];0.84[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10261132	1.00[CHB][hapmap]
rs10271376	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10271680	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10277680	1.00[CEU][hapmap];1.00[CHB][hapmap];0.86[YRI][hapmap];0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11769397	1.00[CHB][hapmap]
rs11975153	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11975663	1.00[CHB][hapmap]
rs12537526	1.00[CHB][hapmap]
rs12538286	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12538988	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12539349	1.00[CHB][hapmap]
rs12539846	1.00[CEU][hapmap];1.00[CHB][hapmap];0.86[YRI][hapmap];0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1734886	0.87[ASN][1000 genomes]
rs17409879	1.00[CHB][hapmap]
rs17410356	1.00[CHB][hapmap]
rs17495148	1.00[CHB][hapmap]
rs17496657	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2268030	0.80[EUR][1000 genomes]
rs28401723	1.00[ASN][1000 genomes]
rs28603325	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs382934	0.85[CEU][hapmap]
rs55851631	0.80[ASN][1000 genomes]
rs59220714	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6465850	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67245174	0.86[ASN][1000 genomes]
rs6959475	1.00[CEU][hapmap];1.00[CHB][hapmap];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6973312	1.00[CHB][hapmap]
rs73187803	0.81[AFR][1000 genomes];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73187816	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7776498	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7780631	1.00[CHB][hapmap]
rs7797764	1.00[CHB][hapmap]
rs7798358	1.00[CEU][hapmap];1.00[CHB][hapmap];0.85[YRI][hapmap];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7801220	0.86[CEU][hapmap]
rs7805379	1.00[CHB][hapmap]
rs7807344	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:123 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:101708200-101765000	Weak transcription	Small Intestine	intestine
2	chr7:101716400-101758600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
3	chr7:101733200-101758600	Weak transcription	Psoas Muscle	Psoas
4	chr7:101738400-101760800	Weak transcription	NHDF-Ad	bronchial
5	chr7:101738600-101758400	Weak transcription	Colon Smooth Muscle	Colon
6	chr7:101738600-101763600	Strong transcription	Monocytes-CD14+_RO01746	blood
7	chr7:101738800-101763800	Strong transcription	Primary neutrophils fromperipheralblood	blood
8	chr7:101738800-101764200	Strong transcription	Fetal Thymus	thymus
9	chr7:101739000-101760600	Weak transcription	NHLF	lung
10	chr7:101739200-101760600	Weak transcription	HSMM	muscle
11	chr7:101739200-101763400	Strong transcription	Primary monocytes fromperipheralblood	blood
12	chr7:101740400-101763400	Strong transcription	Dnd41	blood
13	chr7:101740400-101764000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
14	chr7:101741000-101757200	Weak transcription	NH-A	brain
15	chr7:101741000-101765000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
16	chr7:101741600-101764800	Weak transcription	Stomach Mucosa	stomach
17	chr7:101744600-101765000	Weak transcription	HUVEC	blood vessel
18	chr7:101745000-101758600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
19	chr7:101745600-101758600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
20	chr7:101746000-101765000	Weak transcription	HMEC	breast
21	chr7:101746600-101758600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
22	chr7:101746600-101764200	Strong transcription	Primary hematopoietic stem cells short term culture	blood
23	chr7:101746800-101758000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
24	chr7:101746800-101759200	Weak transcription	Colonic Mucosa	Colon
25	chr7:101747800-101762800	Weak transcription	Fetal Kidney	kidney
26	chr7:101748600-101756600	Weak transcription	Aorta	Aorta
27	chr7:101748600-101756800	Weak transcription	Rectal Mucosa Donor 31	rectum
28	chr7:101748600-101757800	Weak transcription	Primary T helper cells PMA-I stimulated	--
29	chr7:101748600-101758200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
30	chr7:101748600-101758600	Weak transcription	Muscle Satellite Cultured Cells	--
31	chr7:101748600-101765000	Weak transcription	NHEK	skin
32	chr7:101748800-101757200	Weak transcription	A549	lung
33	chr7:101748800-101758600	Weak transcription	K562	blood
34	chr7:101750000-101760400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
35	chr7:101750200-101756000	Weak transcription	Osteobl	bone
36	chr7:101750200-101757200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
37	chr7:101750200-101771000	Weak transcription	Fetal Heart	heart
38	chr7:101750400-101758600	Weak transcription	Rectal Smooth Muscle	rectum
39	chr7:101751000-101759000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
40	chr7:101751200-101756600	Weak transcription	Placenta Amnion	Placenta Amnion
41	chr7:101751400-101756200	Weak transcription	HepG2	liver
42	chr7:101751400-101756400	Weak transcription	Stomach Smooth Muscle	stomach
43	chr7:101751400-101757000	Weak transcription	Left Ventricle	heart
44	chr7:101751400-101758400	Weak transcription	Duodenum Smooth Muscle	Duodenum
45	chr7:101751400-101758600	Weak transcription	Ovary	ovary
46	chr7:101751400-101758600	Weak transcription	Skeletal Muscle Male	skeletal muscle
47	chr7:101751600-101764800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
48	chr7:101752000-101758000	Weak transcription	Right Ventricle	heart
49	chr7:101752800-101755400	Strong transcription	Hela-S3	cervix
50	chr7:101753000-101760600	Strong transcription	Placenta	Placenta

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