Variant report

Variant	rs9657031
Chromosome Location	chr8:63217584-63217585
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 82 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:45)

rs_ID	r²[population]
rs10090048	0.95[ASN][1000 genomes]
rs10090858	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10094502	0.95[ASN][1000 genomes]
rs10095168	0.93[ASN][1000 genomes]
rs10099748	0.92[ASN][1000 genomes]
rs10101551	0.96[ASN][1000 genomes]
rs1154592	0.94[ASN][1000 genomes]
rs11774413	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11778470	0.94[ASN][1000 genomes]
rs12548234	0.94[ASN][1000 genomes]
rs13252919	0.94[ASN][1000 genomes]
rs13255752	0.96[ASN][1000 genomes]
rs13261910	0.86[ASN][1000 genomes]
rs13268451	0.95[ASN][1000 genomes]
rs13271280	0.94[ASN][1000 genomes]
rs13281158	0.94[ASN][1000 genomes]
rs1351702	0.95[ASN][1000 genomes]
rs1384675	0.96[ASN][1000 genomes]
rs1384678	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1384683	0.95[ASN][1000 genomes]
rs1384684	0.95[ASN][1000 genomes]
rs1483165	0.96[ASN][1000 genomes]
rs1483173	0.94[ASN][1000 genomes]
rs1483176	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1552205	0.96[ASN][1000 genomes]
rs2351652	0.94[ASN][1000 genomes]
rs2351653	1.00[ASN][1000 genomes]
rs2625413	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs28556827	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs2882742	0.94[ASN][1000 genomes]
rs4262319	0.94[ASN][1000 genomes]
rs4391424	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4637821	0.94[ASN][1000 genomes]
rs4738948	0.95[ASN][1000 genomes]
rs4738949	0.84[ASN][1000 genomes]
rs6983788	0.95[ASN][1000 genomes]
rs7017869	0.94[ASN][1000 genomes]
rs7017975	0.94[ASN][1000 genomes]
rs7829743	0.80[EUR][1000 genomes]
rs7834815	0.94[ASN][1000 genomes]
rs900491	0.94[ASN][1000 genomes]
rs900492	0.94[ASN][1000 genomes]
rs9643536	0.94[ASN][1000 genomes]
rs9792368	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs9987255	0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:37 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1019143	chr8:63142202-63390820	Bivalent/Poised TSS Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	esv2757277	chr8:63156123-63260182	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
3	esv2759621	chr8:63156123-63260182	Enhancers Bivalent/Poised TSS Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
4	nsv818632	chr8:63208699-63222881	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
5	esv2761215	chr8:63212769-63229146	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
6	nsv611445	chr8:63214002-63227321	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
7	esv3515684	chr8:63214098-63226396	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
8	esv2443694	chr8:63214138-63226350	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
9	nsv6225	chr8:63214240-63262285	Enhancers Weak transcription ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
10	esv3515683	chr8:63214648-63226246	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
11	esv2484852	chr8:63214789-63225986	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
12	nsv8356	chr8:63215158-63225678	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
13	esv3515682	chr8:63215200-63225306	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
14	esv3479356	chr8:63215208-63225350	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
15	esv2159853	chr8:63215215-63225390	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
16	esv3515679	chr8:63215239-63225378	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
17	esv3479358	chr8:63215256-63225324	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
18	esv3515680	chr8:63215271-63225335	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
19	esv3479355	chr8:63215273-63225361	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
20	esv3479357	chr8:63215294-63225342	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
21	nsv515094	chr8:63215334-63225046	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
22	esv3479359	chr8:63215336-63225232	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
23	esv18522	chr8:63215345-63225085	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
24	esv3515681	chr8:63215346-63225233	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
25	nsv499495	chr8:63215349-63225231	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
26	esv3479360	chr8:63215350-63225231	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
27	esv3515686	chr8:63215350-63225231	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
28	esv3692989	chr8:63215615-63222881	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
29	nsv517136	chr8:63215615-63222881	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
30	nsv465699	chr8:63215615-63222881	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
31	nsv465700	chr8:63215615-63222881	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
32	nsv611446	chr8:63215615-63222881	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
33	nsv818634	chr8:63215615-63222881	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
34	esv2421340	chr8:63215615-63224085	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
35	nsv818635	chr8:63215615-63245683	Enhancers Weak transcription ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
36	esv1795315	chr8:63217551-63224085	Enhancers	n/a	n/a	inside rSNPs	diseases
37	nsv442520	chr8:63217551-63224085	Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:63217400-63217600	Enhancers	iPS-15b Cell Line	embryonic stem cell

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