The 2.0 version of rSNPBase

Variant report

Variant rs9660398
Chromosome Location chr1:92731194-92731195
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:92707200-92764000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:92708200-92741200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
3 chr1:92709000-92737200 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr1:92709000-92762800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr1:92709400-92735800 Weak transcription Primary T killer memory cells from peripheral blood blood
6 chr1:92710000-92737600 Weak transcription HSMM muscle
7 chr1:92710000-92745200 Weak transcription Brain Hippocampus Middle brain
8 chr1:92710200-92739400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr1:92710600-92753200 Weak transcription Small Intestine intestine
10 chr1:92710600-92762000 Weak transcription Fetal Brain Male brain
11 chr1:92710600-92763400 Weak transcription Brain Angular Gyrus brain
12 chr1:92710600-92764000 Weak transcription Gastric stomach
13 chr1:92711000-92763600 Weak transcription HSMMtube muscle
14 chr1:92711200-92738200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr1:92711200-92742800 Weak transcription NHLF lung
16 chr1:92711200-92761600 Weak transcription Skeletal Muscle Male skeletal muscle
17 chr1:92711200-92764000 Weak transcription Spleen Spleen
18 chr1:92715000-92731600 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr1:92715600-92738200 Weak transcription K562 blood
20 chr1:92717400-92734800 Weak transcription Psoas Muscle Psoas
21 chr1:92718000-92738200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr1:92719400-92745000 Weak transcription Esophagus oesophagus
23 chr1:92719400-92764000 Weak transcription Pancreas Pancrea
24 chr1:92719600-92760800 Weak transcription Fetal Heart heart
25 chr1:92720000-92763800 Weak transcription Rectal Smooth Muscle rectum
26 chr1:92720200-92734400 Weak transcription Placenta Amnion Placenta Amnion
27 chr1:92720200-92737600 Weak transcription Brain Anterior Caudate brain
28 chr1:92720200-92739000 Weak transcription Aorta Aorta
29 chr1:92720400-92748400 Weak transcription Pancreatic Islets Pancreatic Islet
30 chr1:92721400-92731400 Weak transcription Fetal Kidney kidney
31 chr1:92721600-92742400 Weak transcription Cortex derived primary cultured neurospheres brain
32 chr1:92722400-92763400 Weak transcription iPS-15b Cell Line embryonic stem cell
33 chr1:92723000-92763800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
34 chr1:92724000-92760600 Weak transcription Colon Smooth Muscle Colon
35 chr1:92724200-92731400 Strong transcription Fetal Thymus thymus
36 chr1:92724200-92740800 Strong transcription Primary T helper cells fromperipheralblood blood
37 chr1:92724200-92745000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
38 chr1:92724200-92746200 Strong transcription Monocytes-CD14+_RO01746 blood
39 chr1:92724200-92746400 Strong transcription Dnd41 blood
40 chr1:92724400-92736000 Strong transcription Primary monocytes fromperipheralblood blood
41 chr1:92724400-92740000 Strong transcription HUES48 Cell Line embryonic stem cell
42 chr1:92724400-92746400 Strong transcription HUES64 Cell Line embryonic stem cell
43 chr1:92724400-92746600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
44 chr1:92724600-92763800 Weak transcription Brain Substantia Nigra brain
45 chr1:92724800-92747400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr1:92725200-92734800 Weak transcription Brain Germinal Matrix brain
47 chr1:92725400-92731400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
48 chr1:92725600-92738200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr1:92725800-92764000 Weak transcription Colonic Mucosa Colon
50 chr1:92726000-92735200 Weak transcription Primary T helper 17 cells PMA-I stimulated --

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Last update: Aug 31, 2015