Variant report

Variant	rs9667145
Chromosome Location	chr11:76073431-76073432
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MYC	chr11:76073294-76073460	MCF10A-Er-Src	breast:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:76072573..76074969-chr11:76078510..76081231,2	K562	blood:
2	chr11:76073015..76075782-chr11:76080642..76082701,2	MCF-7	breast:

Variant related genes	Relation type
PRKRIR	TF binding region
ENSG00000137492	Chromatin interaction

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs17749447	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4320976	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs56012153	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs72998419	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs73002532	0.97[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs73002551	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7948288	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv521451	chr11:76053527-76087844	Strong transcription Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region miRNA target site	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:111 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:76054600-76080600	Weak transcription	Psoas Muscle	Psoas
2	chr11:76056800-76080600	Weak transcription	Small Intestine	intestine
3	chr11:76059000-76082000	Weak transcription	HMEC	breast
4	chr11:76062600-76079200	Weak transcription	Stomach Mucosa	stomach
5	chr11:76063000-76077000	Weak transcription	H9 Cell Line	embryonic stem cell
6	chr11:76066000-76073800	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
7	chr11:76066000-76077600	Strong transcription	Primary T helper cells fromperipheralblood	blood
8	chr11:76066200-76079400	Weak transcription	Pancreatic Islets	Pancreatic Islet
9	chr11:76066200-76085800	Weak transcription	Esophagus	oesophagus
10	chr11:76066400-76077000	Weak transcription	Fetal Heart	heart
11	chr11:76066400-76079600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
12	chr11:76066400-76089200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
13	chr11:76066400-76090000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
14	chr11:76066600-76074400	Weak transcription	Brain Germinal Matrix	brain
15	chr11:76066600-76074800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
16	chr11:76066600-76076000	Weak transcription	Thymus	Thymus
17	chr11:76066600-76076800	Strong transcription	Primary monocytes fromperipheralblood	blood
18	chr11:76066600-76080600	Weak transcription	Spleen	Spleen
19	chr11:76066600-76082000	Weak transcription	Right Ventricle	heart
20	chr11:76066600-76082000	Weak transcription	NH-A	brain
21	chr11:76066600-76090000	Weak transcription	Fetal Brain Female	brain
22	chr11:76066800-76074200	Strong transcription	Monocytes-CD14+_RO01746	blood
23	chr11:76066800-76082000	Weak transcription	Stomach Smooth Muscle	stomach
24	chr11:76067200-76077200	Weak transcription	HepG2	liver
25	chr11:76067400-76074800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
26	chr11:76067400-76076000	Weak transcription	Primary neutrophils fromperipheralblood	blood
27	chr11:76067400-76076800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
28	chr11:76067400-76077800	Weak transcription	Placenta Amnion	Placenta Amnion
29	chr11:76067400-76080600	Weak transcription	Right Atrium	heart
30	chr11:76067400-76082000	Weak transcription	NHLF	lung
31	chr11:76067600-76074000	Weak transcription	Fetal Intestine Small	intestine
32	chr11:76067600-76074000	Weak transcription	Pancreas	Pancrea
33	chr11:76067600-76074800	Strong transcription	Primary hematopoietic stem cells	blood
34	chr11:76067600-76075400	Weak transcription	Fetal Muscle Trunk	muscle
35	chr11:76067600-76075600	Weak transcription	Fetal Muscle Leg	muscle
36	chr11:76067600-76076000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
37	chr11:76067600-76076000	Weak transcription	Ovary	ovary
38	chr11:76067600-76076000	Strong transcription	Dnd41	blood
39	chr11:76067600-76076400	Weak transcription	Gastric	stomach
40	chr11:76067600-76076600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
41	chr11:76067600-76079000	Weak transcription	Fetal Lung	lung
42	chr11:76067600-76079400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
43	chr11:76067600-76082000	Weak transcription	Aorta	Aorta
44	chr11:76067600-76082000	Weak transcription	Brain Inferior Temporal Lobe	brain
45	chr11:76067600-76082000	Weak transcription	GM12878-XiMat	blood
46	chr11:76067600-76082000	Weak transcription	NHEK	skin
47	chr11:76067600-76082200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
48	chr11:76067600-76082400	Weak transcription	Cortex derived primary cultured neurospheres	brain
49	chr11:76067600-76085800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
50	chr11:76067600-76090400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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