The 2.0 version of rSNPBase

Variant report

Variant rs967325
Chromosome Location chr1:67003722-67003723
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:67000000-67004800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr1:67000000-67005000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr1:67000000-67005400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr1:67000200-67006400 Weak transcription H9 Cell Line embryonic stem cell
5 chr1:67000400-67005000 Weak transcription Breast Myoepithelial Primary Cells Breast
6 chr1:67000400-67005200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr1:67000400-67008000 Weak transcription Lung lung
8 chr1:67000400-67022000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr1:67000800-67029800 Weak transcription Primary hematopoietic stem cells blood
10 chr1:67001000-67006200 Weak transcription HepG2 liver
11 chr1:67001000-67008000 Weak transcription Left Ventricle heart
12 chr1:67001200-67022000 Weak transcription Right Ventricle heart
13 chr1:67001400-67005400 Weak transcription Fetal Lung lung
14 chr1:67001600-67011000 Weak transcription Stomach Smooth Muscle stomach
15 chr1:67001800-67006000 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr1:67002000-67005600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr1:67002000-67010600 Weak transcription Pancreatic Islets Pancreatic Islet
18 chr1:67002200-67006400 Weak transcription Osteobl bone
19 chr1:67002400-67004200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr1:67002600-67006000 Weak transcription HUVEC blood vessel
21 chr1:67002600-67006400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr1:67002800-67004200 Weak transcription Brain Cingulate Gyrus brain
23 chr1:67002800-67004200 Weak transcription Fetal Heart heart
24 chr1:67002800-67004200 Weak transcription NHDF-Ad bronchial
25 chr1:67002800-67004400 Weak transcription Brain Angular Gyrus brain
26 chr1:67002800-67004800 Weak transcription Muscle Satellite Cultured Cells --
27 chr1:67002800-67004800 Weak transcription Brain Substantia Nigra brain
28 chr1:67002800-67005000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
29 chr1:67002800-67005200 Weak transcription NH-A brain
30 chr1:67002800-67008200 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr1:67003000-67004200 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
32 chr1:67003000-67004800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr1:67003000-67006200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr1:67003000-67012400 Enhancers Brain Hippocampus Middle brain
35 chr1:67003200-67003800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr1:67003200-67005400 Weak transcription Fetal Brain Female brain
37 chr1:67003400-67004200 Weak transcription Fetal Brain Male brain
38 chr1:67003400-67004400 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
39 chr1:67003400-67004400 Weak transcription NHLF lung
40 chr1:67003600-67003800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
41 chr1:67003600-67003800 Flanking Active TSS Brain Anterior Caudate brain
42 chr1:67003600-67004800 Weak transcription Aorta Aorta
43 chr1:67003600-67005000 Weak transcription Brain Inferior Temporal Lobe brain

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Last update: Aug 31, 2015