The 2.0 version of rSNPBase

Variant report

Variant rs9687723
Chromosome Location chr5:118707005-118707006
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:118692000-118707200 Enhancers Primary T killer naive cells fromperipheralblood blood
2 chr5:118694000-118707200 Enhancers Primary T helper naive cells from peripheral blood blood
3 chr5:118700200-118713800 Weak transcription H9 Cell Line embryonic stem cell
4 chr5:118702200-118710200 Weak transcription Fetal Lung lung
5 chr5:118702800-118707400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr5:118702800-118710800 Weak transcription Left Ventricle heart
7 chr5:118702800-118713400 Weak transcription Aorta Aorta
8 chr5:118702800-118713400 Weak transcription Fetal Stomach stomach
9 chr5:118702800-118713600 Weak transcription HUES48 Cell Line embryonic stem cell
10 chr5:118702800-118714400 Weak transcription Placenta Placenta
11 chr5:118702800-118715000 Weak transcription Stomach Smooth Muscle stomach
12 chr5:118702800-118715400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr5:118702800-118720000 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr5:118702800-118720800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr5:118702800-118722400 Weak transcription Spleen Spleen
16 chr5:118702800-118723800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
17 chr5:118702800-118736000 Weak transcription Fetal Muscle Leg muscle
18 chr5:118703000-118713000 Weak transcription Duodenum Mucosa Duodenum
19 chr5:118703800-118714000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr5:118704200-118707400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
21 chr5:118704200-118708800 Weak transcription Dnd41 blood
22 chr5:118704400-118707200 Transcr. at gene 5' and 3' GM12878-XiMat blood
23 chr5:118704400-118709200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr5:118704400-118722800 Weak transcription HMEC breast
25 chr5:118704400-118728400 Weak transcription Hela-S3 cervix
26 chr5:118704600-118714200 Weak transcription Adipose Nuclei Adipose
27 chr5:118704600-118723400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr5:118704800-118708200 Weak transcription Fetal Thymus thymus
29 chr5:118705000-118707200 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
30 chr5:118705000-118711200 Genic enhancers Primary B cells from peripheral blood blood
31 chr5:118705200-118707200 Genic enhancers Primary T cells from cord blood blood
32 chr5:118705400-118707200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr5:118705400-118707200 Enhancers HSMMtube muscle
34 chr5:118705400-118707400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr5:118705400-118707600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr5:118705600-118707200 Enhancers NHDF-Ad bronchial
37 chr5:118705600-118707200 Enhancers Osteobl bone
38 chr5:118705600-118707400 Weak transcription Primary T cells fromperipheralblood blood
39 chr5:118705600-118708800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
40 chr5:118705600-118711800 Weak transcription Primary T helper naive cells fromperipheralblood blood
41 chr5:118705800-118707600 Enhancers Primary hematopoietic stem cells blood
42 chr5:118705800-118707600 Enhancers Primary hematopoietic stem cells short term culture blood
43 chr5:118705800-118707600 Genic enhancers Primary T helper 17 cells PMA-I stimulated --
44 chr5:118705800-118708800 Weak transcription Monocytes-CD14+_RO01746 blood
45 chr5:118705800-118714400 Weak transcription Thymus Thymus
46 chr5:118706000-118713400 Weak transcription iPS-18 Cell Line embryonic stem cell
47 chr5:118706200-118707200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr5:118706200-118707200 Enhancers Muscle Satellite Cultured Cells --
49 chr5:118706200-118707600 Genic enhancers Primary B cells from cord blood blood
50 chr5:118706400-118707200 Enhancers Primary T helper cells fromperipheralblood blood

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Last update: Aug 31, 2015