Variant report

Variant	rs974780
Chromosome Location	chr8:49930976-49930977
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 62 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:62)

rs_ID	r²[population]
rs10105794	0.81[EUR][1000 genomes]
rs10435574	0.83[EUR][1000 genomes]
rs10435612	0.86[EUR][1000 genomes]
rs10504070	0.94[EUR][1000 genomes]
rs10504072	0.86[EUR][1000 genomes]
rs10808744	0.86[EUR][1000 genomes]
rs10808745	0.86[EUR][1000 genomes]
rs10957337	0.96[EUR][1000 genomes]
rs10957356	0.94[EUR][1000 genomes]
rs10957357	0.92[CEU][hapmap];0.84[EUR][1000 genomes]
rs11778863	0.97[EUR][1000 genomes]
rs11784268	0.97[EUR][1000 genomes]
rs11997959	0.81[EUR][1000 genomes]
rs12056536	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12156111	0.81[EUR][1000 genomes]
rs12546490	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12548464	0.80[EUR][1000 genomes]
rs12549138	0.82[EUR][1000 genomes]
rs1511359	0.82[EUR][1000 genomes]
rs1511365	0.94[EUR][1000 genomes]
rs17642290	0.82[ASN][1000 genomes]
rs17644494	0.80[EUR][1000 genomes]
rs2292399	0.92[CEU][hapmap];0.86[EUR][1000 genomes]
rs28685207	0.82[EUR][1000 genomes]
rs35282337	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4348510	0.81[EUR][1000 genomes]
rs4406405	0.97[EUR][1000 genomes]
rs4493917	0.81[EUR][1000 genomes]
rs4493918	0.81[EUR][1000 genomes]
rs4873092	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs4873096	0.84[EUR][1000 genomes]
rs4873098	0.81[EUR][1000 genomes]
rs4873300	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4873304	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4873306	0.97[EUR][1000 genomes]
rs4873307	0.97[EUR][1000 genomes]
rs4873309	0.84[EUR][1000 genomes]
rs4873312	0.93[CEU][hapmap];0.86[EUR][1000 genomes]
rs4873314	0.81[EUR][1000 genomes]
rs4873317	0.81[EUR][1000 genomes]
rs55795863	0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs55920380	0.81[EUR][1000 genomes]
rs55948643	0.80[EUR][1000 genomes]
rs56057508	0.86[EUR][1000 genomes]
rs56074306	0.97[EUR][1000 genomes]
rs56078938	0.96[AFR][1000 genomes];0.97[EUR][1000 genomes]
rs57085792	0.81[EUR][1000 genomes]
rs59064792	0.81[EUR][1000 genomes]
rs60449482	0.94[EUR][1000 genomes]
rs62507167	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs62507177	0.94[EUR][1000 genomes]
rs62507178	0.90[AFR][1000 genomes];0.97[EUR][1000 genomes]
rs62507245	0.82[EUR][1000 genomes]
rs62507246	0.81[EUR][1000 genomes]
rs62507247	0.81[EUR][1000 genomes]
rs6472220	0.82[EUR][1000 genomes]
rs6997703	0.83[EUR][1000 genomes]
rs7817571	0.83[EUR][1000 genomes]
rs7820270	1.00[CEU][hapmap];0.92[EUR][1000 genomes]
rs9298106	0.82[EUR][1000 genomes]
rs9643394	0.81[EUR][1000 genomes]
rs9643395	0.81[EUR][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49930400-49931400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr8:49930600-49931000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr8:49930600-49931000	Enhancers	HUES6 Cell Line	embryonic stem cell
4	chr8:49930600-49931000	Enhancers	Fetal Muscle Leg	muscle
5	chr8:49930600-49931400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr8:49930600-49931400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr8:49930600-49931600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr8:49930800-49931000	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
9	chr8:49930800-49931200	Enhancers	iPS-18 Cell Line	embryonic stem cell
10	chr8:49930800-49931400	Enhancers	iPS-15b Cell Line	embryonic stem cell
11	chr8:49930800-49931400	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
12	chr8:49930800-49931400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
13	chr8:49930800-49931400	Enhancers	Fetal Muscle Trunk	muscle

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