Variant report

Variant	rs9806063
Chromosome Location	chr14:72417827-72417828
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:72409621..72411611-chr14:72415425..72418350,2	K562	blood:

Extended variants
information (count: 53 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:52)

rs_ID	r²[population]
rs1009018	0.81[EUR][1000 genomes]
rs1978226	0.81[EUR][1000 genomes]
rs2190874	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2215133	0.90[EUR][1000 genomes]
rs2877772	0.88[EUR][1000 genomes]
rs2877773	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs36319	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs36320	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs36321	0.80[EUR][1000 genomes]
rs36322	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs36323	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs36324	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs36325	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs36328	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs36329	0.88[EUR][1000 genomes]
rs36330	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs36331	0.88[EUR][1000 genomes]
rs36333	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs36334	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs36337	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs36338	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs36339	0.90[EUR][1000 genomes]
rs36342	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs36343	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs36346	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs36347	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs36348	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs36349	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs36352	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs36353	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs36354	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs36355	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs36357	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs36358	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs36359	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs36362	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs36364	0.80[AMR][1000 genomes]
rs4243639	0.90[EUR][1000 genomes]
rs4899406	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4899408	0.90[EUR][1000 genomes]
rs4902959	0.90[EUR][1000 genomes]
rs4902962	0.90[EUR][1000 genomes]
rs61996396	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6574036	0.88[EUR][1000 genomes]
rs7161413	0.81[EUR][1000 genomes]
rs722975	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs728494	0.90[EUR][1000 genomes]
rs728495	0.88[EUR][1000 genomes]
rs728498	0.90[EUR][1000 genomes]
rs758236	0.88[EUR][1000 genomes]
rs8014500	0.81[EUR][1000 genomes]
rs991890	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530794	chr14:72113818-73034008	Enhancers Bivalent/Poised TSS Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:72410600-72425400	Weak transcription	Left Ventricle	heart
2	chr14:72417600-72418400	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr14:72417800-72425200	Weak transcription	Cortex derived primary cultured neurospheres	brain

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