The 2.0 version of rSNPBase

Variant report

Variant rs9850566
Chromosome Location chr3:145933090-145933091
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:145897000-145933600 Weak transcription Fetal Stomach stomach
2 chr3:145903000-145934800 Weak transcription Muscle Satellite Cultured Cells --
3 chr3:145905000-145933600 Weak transcription NHLF lung
4 chr3:145907000-145938600 Weak transcription Fetal Intestine Small intestine
5 chr3:145907600-145939200 Weak transcription Brain Anterior Caudate brain
6 chr3:145908200-145936400 Weak transcription A549 lung
7 chr3:145909600-145939200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr3:145910400-145940000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
9 chr3:145913800-145939200 Weak transcription Rectal Smooth Muscle rectum
10 chr3:145914200-145937000 Weak transcription Placenta Placenta
11 chr3:145914600-145940200 Weak transcription Gastric stomach
12 chr3:145914800-145940200 Weak transcription Psoas Muscle Psoas
13 chr3:145914800-145940400 Weak transcription Spleen Spleen
14 chr3:145917800-145940400 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr3:145918000-145940400 Weak transcription Pancreas Pancrea
16 chr3:145918400-145940400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr3:145919000-145934800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr3:145920600-145940600 Weak transcription Primary hematopoietic stem cells short term culture blood
19 chr3:145921600-145940200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr3:145922000-145934800 Weak transcription Left Ventricle heart
21 chr3:145922200-145935000 Weak transcription NHDF-Ad bronchial
22 chr3:145922600-145933400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr3:145922600-145940400 Weak transcription Lung lung
24 chr3:145924400-145939200 Weak transcription Rectal Mucosa Donor 29 rectum
25 chr3:145924400-145944000 Weak transcription Colon Smooth Muscle Colon
26 chr3:145924400-145945200 Weak transcription HSMMtube muscle
27 chr3:145924600-145934400 Weak transcription Fetal Adrenal Gland Adrenal Gland
28 chr3:145924600-145937200 Weak transcription Fetal Muscle Leg muscle
29 chr3:145924600-145939000 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr3:145924600-145940200 Weak transcription Aorta Aorta
31 chr3:145924800-145933400 Weak transcription Fetal Intestine Large intestine
32 chr3:145924800-145935000 Weak transcription HepG2 liver
33 chr3:145925000-145945600 Weak transcription Cortex derived primary cultured neurospheres brain
34 chr3:145925200-145933200 Weak transcription Adipose Nuclei Adipose
35 chr3:145925200-145933400 Weak transcription Ovary ovary
36 chr3:145925400-145952800 Weak transcription Primary hematopoietic stem cells blood
37 chr3:145925600-145933600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr3:145925600-145934600 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr3:145925600-145950800 Weak transcription Fetal Kidney kidney
40 chr3:145926000-145933400 Weak transcription HUVEC blood vessel
41 chr3:145927200-145933400 Weak transcription Stomach Smooth Muscle stomach
42 chr3:145927600-145938400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr3:145930000-145933400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr3:145931400-145934600 Weak transcription Breast Myoepithelial Primary Cells Breast
45 chr3:145932000-145934000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr3:145932000-145935600 Strong transcription Liver Liver
47 chr3:145932400-145936200 Strong transcription Fetal Lung lung
48 chr3:145932600-145943800 Weak transcription Brain Hippocampus Middle brain
49 chr3:145932800-145934800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr3:145932800-145941000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015