Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11150248	0.83[EUR][1000 genomes]
rs11150249	0.84[EUR][1000 genomes]
rs12102804	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1382389	0.83[EUR][1000 genomes]
rs16952547	0.85[ASN][1000 genomes]
rs1871209	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2169804	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2169806	0.96[CEU][hapmap];0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs4889112	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4889115	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4889116	0.85[EUR][1000 genomes]
rs7193651	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7205467	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs8045772	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs8045793	0.83[EUR][1000 genomes]
rs8045952	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs8047391	0.84[EUR][1000 genomes]
rs8060188	0.86[CHB][hapmap]
rs8061813	0.83[EUR][1000 genomes]
rs9673185	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs9930130	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9940589	0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv833298	chr16:80122337-80314603	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv1055982	chr16:80151604-80202923	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:80186400-80191800	Weak transcription	Muscle Satellite Cultured Cells	--
2	chr16:80186400-80191800	Weak transcription	NH-A	brain
3	chr16:80186600-80191200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr16:80186600-80191600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
5	chr16:80186600-80191800	Weak transcription	Osteobl	bone
6	chr16:80186600-80192600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
7	chr16:80186600-80197600	Weak transcription	HSMMtube	muscle

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