The 2.0 version of rSNPBase

Variant report

Variant rs9973857
Chromosome Location chr2:182170126-182170127
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:182166000-182170200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
2 chr2:182166200-182170200 Weak transcription Duodenum Mucosa Duodenum
3 chr2:182167800-182170200 Enhancers Primary T cells fromperipheralblood blood
4 chr2:182168400-182171400 Enhancers Primary T helper cells fromperipheralblood blood
5 chr2:182168400-182174000 Enhancers Primary hematopoietic stem cells short term culture blood
6 chr2:182168600-182170400 Enhancers Primary T killer naive cells fromperipheralblood blood
7 chr2:182168600-182170400 Enhancers Fetal Thymus thymus
8 chr2:182168600-182171400 Flanking Active TSS GM12878-XiMat blood
9 chr2:182168600-182174000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
10 chr2:182168600-182174200 Enhancers Primary B cells from peripheral blood blood
11 chr2:182168600-182176800 Enhancers Primary neutrophils fromperipheralblood blood
12 chr2:182168800-182170600 Enhancers Primary Natural Killer cells fromperipheralblood blood
13 chr2:182168800-182171200 Enhancers Primary mononuclear cells fromperipheralblood Blood
14 chr2:182168800-182172200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr2:182168800-182172400 Flanking Active TSS Primary T helper cells PMA-I stimulated --
16 chr2:182168800-182174200 Enhancers Primary monocytes fromperipheralblood blood
17 chr2:182169000-182170200 Enhancers Primary T regulatory cells fromperipheralblood blood
18 chr2:182169000-182171800 Enhancers HepG2 liver
19 chr2:182169000-182172200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr2:182169000-182172200 Flanking Active TSS Primary T cells from cord blood blood
21 chr2:182169200-182170200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr2:182169200-182170400 Weak transcription Lung lung
23 chr2:182169400-182170400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
24 chr2:182169400-182170400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
25 chr2:182169400-182170400 Enhancers Primary T killer memory cells from peripheral blood blood
26 chr2:182169400-182170400 Weak transcription Adipose Nuclei Adipose
27 chr2:182169400-182170800 Enhancers iPS-15b Cell Line embryonic stem cell
28 chr2:182169600-182170200 Enhancers Primary B cells from cord blood blood
29 chr2:182169600-182170200 Enhancers Primary T helper naive cells fromperipheralblood blood
30 chr2:182169800-182170800 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
31 chr2:182169800-182171000 Flanking Active TSS Thymus Thymus
32 chr2:182169800-182171600 Enhancers Fetal Heart heart
33 chr2:182169800-182172200 Flanking Active TSS Monocytes-CD14+_RO01746 blood
34 chr2:182170000-182170400 Enhancers Primary hematopoietic stem cells blood
35 chr2:182170000-182170800 Enhancers HUES48 Cell Line embryonic stem cell
36 chr2:182170000-182170800 Enhancers HUES64 Cell Line embryonic stem cell
37 chr2:182170000-182170800 Enhancers iPS-18 Cell Line embryonic stem cell
38 chr2:182170000-182171400 Enhancers Fetal Lung lung
39 chr2:182170000-182171600 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
40 chr2:182170000-182172200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
41 chr2:182170000-182172200 Enhancers Rectal Mucosa Donor 29 rectum
42 chr2:182170000-182172200 Flanking Active TSS Dnd41 blood

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Last update: Aug 31, 2015