Variant report

Variant	esv1002924
Chromosome Location	chr15:45412284-45424799
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:301)
CpG islands
(count:1160)
Chromatin interactive
region (count:17)
LncRNA
region (count:4)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:301 , 50 per page) page: 1 2 3 4 5 6 7

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr15:45414357-45414389	HepG2	liver:	n/a	n/a
2	ARID3A	chr15:45418745-45419155	HepG2	liver:	n/a	n/a
3	ARID3A	chr15:45418662-45419119	K562	blood:	n/a	n/a
4	ARID3A	chr15:45423781-45424095	HepG2	liver:	n/a	n/a
5	BACH1	chr15:45421066-45421370	H1-hESC	embryonic stem cell:	n/a	n/a
6	BATF	chr15:45413200-45413678	GM12878	blood:	n/a	n/a
7	BATF	chr15:45413226-45413597	GM12878	blood:	n/a	n/a
8	BCL11A	chr15:45413229-45413657	GM12878	blood:	n/a	n/a
9	BCL11A	chr15:45413347-45413584	GM12878	blood:	n/a	n/a
10	BHLHE40	chr15:45418905-45419058	K562	blood:	n/a	n/a
11	BRCA1	chr15:45419959-45419986	Hela-S3	cervix:	n/a	n/a
12	CEBPB	chr15:45414326-45414523	HepG2	liver:	n/a	n/a
13	CEBPB	chr15:45414226-45414584	IMR90	lung:	n/a	n/a
14	CEBPB	chr15:45417073-45417182	HepG2	liver:	n/a	chr15:45417142-45417153
15	CHD2	chr15:45418847-45418906	K562	blood:	n/a	n/a
16	CTBP2	chr15:45421049-45422126	H1-hESC	embryonic stem cell:	n/a	n/a
17	CTCF	chr15:45418840-45418990	GM12864	blood:	n/a	chr15:45418939-45418957
18	CTCF	chr15:45418800-45418950	WI-38	lung:	n/a	n/a
19	CTCF	chr15:45418880-45419030	HepG2	liver:	n/a	chr15:45418939-45418957
20	CTCF	chr15:45418860-45419010	HAc	cerebellar:	n/a	chr15:45418939-45418957
21	CTCF	chr15:45418843-45419062	Pancreas_OC	pancreas:	n/a	chr15:45418939-45418957
22	CTCF	chr15:45418560-45418710	AG04450	lung:	n/a	n/a
23	CTCF	chr15:45418460-45418610	GM12864	blood:	n/a	n/a
24	CTCF	chr15:45418820-45418970	HVMF	connective:	n/a	chr15:45418939-45418957
25	CTCF	chr15:45418801-45419058	GM13977	blood:	n/a	chr15:45418939-45418957
26	CTCF	chr15:45418840-45418990	MCF-7	breast:	n/a	chr15:45418939-45418957
27	CTCF	chr15:45418880-45419030	AG04449	skin:	n/a	chr15:45418939-45418957
28	CTCF	chr15:45418860-45419010	HCFaa	heart:	n/a	chr15:45418939-45418957
29	CTCF	chr15:45418900-45419050	AG10803	skin:	n/a	chr15:45418939-45418957
30	CTCF	chr15:45418860-45419010	HA-sp	spinal cord:	n/a	chr15:45418939-45418957
31	CTCF	chr15:45418880-45419030	K562	blood:	n/a	chr15:45418939-45418957
32	CTCF	chr15:45418900-45419050	HCM	heart:	n/a	chr15:45418939-45418957
33	CTCF	chr15:45418900-45419050	BE2_C	brain:	n/a	chr15:45418939-45418957
34	CTCF	chr15:45418841-45419053	HepG2	liver:	n/a	chr15:45418939-45418957
35	CTCF	chr15:45418440-45418590	HPAF	blood vessel:	n/a	n/a
36	CTCF	chr15:45418700-45418850	HAc	cerebellar:	n/a	n/a
37	CTCF	chr15:45418840-45418990	HCM	heart:	n/a	chr15:45418939-45418957
38	CTCF	chr15:45418880-45419030	AoAF	blood vessel:	n/a	chr15:45418939-45418957
39	CTCF	chr15:45418880-45419030	WERI-Rb-1	eye:	n/a	chr15:45418939-45418957
40	CTCF	chr15:45418862-45419031	GM19240	blood:	n/a	chr15:45418939-45418957
41	CTCF	chr15:45418860-45419010	NHDF-neo	bronchial:	n/a	chr15:45418939-45418957
42	CTCF	chr15:45418900-45419050	GM12872	blood:	n/a	chr15:45418939-45418957
43	CTCF	chr15:45418864-45419031	GM19239	blood:	n/a	chr15:45418939-45418957
44	CTCF	chr15:45418840-45418990	HEK293	kidney:	n/a	chr15:45418939-45418957
45	CTCF	chr15:45418420-45418570	NHEK	skin:	n/a	n/a
46	CTCF	chr15:45418560-45418710	AG04449	skin:	n/a	n/a
47	CTCF	chr15:45418920-45419070	GM12869	blood:	n/a	chr15:45418939-45418957
48	CTCF	chr15:45418816-45419081	GM12878	blood:	n/a	chr15:45418939-45418957
49	CTCF	chr15:45418860-45419010	GM12874	blood:	n/a	chr15:45418939-45418957
50	CTCF	chr15:45418920-45419070	HFF	foreskin:	n/a	chr15:45418939-45418957

(count:1160 , 50 per page) page: 1 2 3 4 5 6 7 ... 24

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:45417414-45417464	NHBE	bronchial:	n/a
2	chr15:45417414-45417464	NHBE	bronchial:	n/a
3	chr15:45423543-45423593	HMEC	breast:	n/a
4	chr15:45422054-45422104	HCT-116	colon:	n/a
5	chr15:45421998-45422048	GM19239	blood:	n/a
6	chr15:45421860-45421910	H1-hESC	embryonic stem cell:	embryo
7	chr15:45422095-45422145	A549	lung:	n/a
8	chr15:45422393-45422443	LNCaP	prostate:	n/a
9	chr15:45421068-45421118	HEEpiC	esophagus:	n/a
10	chr15:45421749-45421799	ovcar-3	ovarian:	n/a
11	chr15:45421998-45422048	IMR90	lung:	fetal
12	chr15:45412590-45412640	HRCEpiC	kidney:	n/a
13	chr15:45422054-45422104	SKMC	muscle:	n/a
14	chr15:45422054-45422104	SK-N-SH	brain:	n/a
15	chr15:45417414-45417464	PrEC	prostate:	n/a
16	chr15:45422062-45422112	Jurkat	blood:	n/a
17	chr15:45421860-45421910	NT2-D1	testis:	n/a
18	chr15:45421998-45422048	LNCaP	prostate:	n/a
19	chr15:45422553-45422603	NH-A	brain:	n/a
20	chr15:45422325-45422375	AoSMC	blood vessel:	n/a
21	chr15:45421860-45421910	T-47D	breast:	n/a
22	chr15:45421860-45421910	K562	blood:	n/a
23	chr15:45422062-45422112	NHDF-neo	bronchial:	n/a
24	chr15:45421951-45422001	MCF-7	breast:	n/a
25	chr15:45421068-45421118	AG04449	skin:	fetal
26	chr15:45422062-45422112	AG09309	skin:	n/a
27	chr15:45421860-45421910	AG09319	gingival:	n/a
28	chr15:45421612-45421662	ProgFib	skin:	n/a
29	chr15:45421860-45421910	ProgFib	skin:	n/a
30	chr15:45421998-45422048	AoSMC	blood vessel:	n/a
31	chr15:45422004-45422054	HAEpiC	amniotic membrane:	n/a
32	chr15:45422004-45422054	HCT-116	colon:	n/a
33	chr15:45422054-45422104	HIPEpiC	eye:	n/a
34	chr15:45422004-45422054	HCM	heart:	n/a
35	chr15:45421951-45422001	Jurkat	blood:	n/a
36	chr15:45421860-45421910	HIPEpiC	eye:	n/a
37	chr15:45417414-45417464	SKMC	muscle:	n/a
38	chr15:45422325-45422375	HRPEpiC	eye:	n/a
39	chr15:45422325-45422375	GM12878	blood:	n/a
40	chr15:45422083-45422133	Hela-S3	cervix:	n/a
41	chr15:45417414-45417464	HMEC	breast:	n/a
42	chr15:45423543-45423593	PFSK-1	brain:	n/a
43	chr15:45421068-45421118	A549	lung:	n/a
44	chr15:45421612-45421662	ovcar-3	ovarian:	n/a
45	chr15:45421998-45422048	GM12891	blood:	n/a
46	chr15:45422083-45422133	H1-hESC	embryonic stem cell:	embryo
47	chr15:45422371-45422421	AG04450	lung:	fetal
48	chr15:45422054-45422104	MCF-7	breast:	n/a
49	chr15:45422371-45422421	HepG2	liver:	n/a
50	chr15:45421951-45422001	AG04449	skin:	fetal

(count:17 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr15:45410636..45412600-chr15:45463074..45466007,2	K562	blood:
2	chr15:45411733..45414237-chr15:45457948..45460622,2	MCF-7	breast:
3	chr15:45410580..45412317-chr15:45415759..45418660,2	K562	blood:
4	chr15:45418967..45421770-chr15:45423953..45425588,2	K562	blood:
5	chr15:45419682..45422492-chr15:45439633..45442095,2	K562	blood:
6	chr15:45412250..45414388-chr15:45434468..45436699,2	K562	blood:
7	chr15:45418671..45419337-chr15:45497010..45497531,2	K562	blood:
8	chr15:45413253..45416460-chr15:45420165..45423361,4	K562	blood:
9	chr15:45409132..45413033-chr15:45458233..45460669,3	MCF-7	breast:
10	chr15:45418525..45419261-chr15:45568782..45569294,2	K562	blood:
11	chr15:45417539..45419456-chr15:45453596..45456552,2	K562	blood:
12	chr15:45409152..45412317-chr15:45414366..45418660,3	K562	blood:
13	chr15:45410032..45410581-chr15:45418687..45419353,3	MCF-7	breast:
14	chr15:45413253..45416460-chr15:45420165..45423361,4	K562	blood:
15	chr15:45410580..45412317-chr15:45415759..45418660,2	K562	blood:
16	chr15:45394002..45396843-chr15:45411789..45413686,2	K562	blood:
17	chr15:45418967..45421770-chr15:45423953..45425588,2	K562	blood:

(count:4 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-DUOX2-3	chr15:45421353-45421813	NONHSAT042217
2	lnc-DUOX2-3	chr15:45422050-45422075	NONHSAT042218
3	lnc-DUOX2-3	chr15:45421371-45421813	NONHSAT042218
4	lnc-DUOX2-3	chr15:45422021-45422078	NONHSAT042217

No data

Variant related genes	Relation type
DUOX1	TF binding region
DUOXA1	TF binding region
DUOX1	CpG island
DUOXA1	CpG island
ENSG00000138606	chromatin interactions
ENSG00000140279	chromatin interactions
ENSG00000137857	chromatin interactions
ENSG00000140254	chromatin interactions
ENSG00000259539	chromatin interactions

Extended variants
information (count: 449 )
Associated
traits (count: 64 )

Variant overlapped rSNPs/rCNVs (count:449 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs267604232	chr15:45412314-45412315	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
2	rs146941277	chr15:45412327-45412328	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
3	rs146181954	chr15:45412333-45412334	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
4	rs201757094	chr15:45412346-45412347	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
5	rs567061569	chr15:45412355-45412356	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
6	rs139046370	chr15:45412369-45412370	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
7	rs200642821	chr15:45412389-45412390	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
8	rs200164792	chr15:45412411-45412412	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
9	rs371597352	chr15:45412426-45412427	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
10	rs149960164	chr15:45412435-45412436	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
11	rs367933259	chr15:45412463-45412464	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
12	rs375934424	chr15:45412485-45412486	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
13	rs550198186	chr15:45412590-45412591	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
14	rs528501658	chr15:45412591-45412592	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
15	rs578186395	chr15:45412592-45412593	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
16	rs112792333	chr15:45412600-45412601	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
17	rs532727492	chr15:45412626-45412627	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs569682046	chr15:45412634-45412635	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs182466172	chr15:45412638-45412639	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs574036594	chr15:45412660-45412661	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs535394171	chr15:45412675-45412676	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs187988297	chr15:45412679-45412680	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs559554507	chr15:45412702-45412703	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs528322709	chr15:45412717-45412718	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs547614157	chr15:45412731-45412732	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs368996883	chr15:45412770-45412771	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs374636586	chr15:45412771-45412772	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs374208931	chr15:45412779-45412780	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs376672007	chr15:45412799-45412800	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
30	rs12916804	chr15:45412800-45412801	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs147223934	chr15:45412823-45412824	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs147797857	chr15:45412832-45412833	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs76617949	chr15:45412835-45412836	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs148263159	chr15:45412847-45412848	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
35	rs574062910	chr15:45412855-45412856	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
36	rs141276414	chr15:45412856-45412857	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
37	rs201168457	chr15:45412871-45412872	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs150765255	chr15:45412888-45412889	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs547005852	chr15:45412898-45412899	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs546326808	chr15:45412905-45412906	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs565411584	chr15:45412929-45412930	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
42	rs370876996	chr15:45412933-45412934	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
43	rs200645130	chr15:45412944-45412945	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs75981505	chr15:45412946-45412947	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs114206612	chr15:45412947-45412948	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
46	rs374710964	chr15:45412986-45412987	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs142864395	chr15:45412995-45412996	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs537744255	chr15:45412996-45412997	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs557659071	chr15:45412997-45412998	Bivalent Enhancer Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
50	rs368844188	chr15:45413053-45413054	Bivalent Enhancer Weak transcription Enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:64)

Disease	PMID	Source
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Testicular germ cell tumor	18059402	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Melanoma	18172304	CNVD
Colorectal cancer	16774939	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Intellectual disability	22102821	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Prostate cancer	16573809	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	21785460	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Ovarian cancer	22174824	CNVD
Prostate cancer	18632612	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Basal cell lymphoma	17053054	CNVD
Cancer	21129771	CNVD
Papillary thyroid carcinoma	22161024	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	21045282	CNVD
Breast cancer	22032731	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Myelofibrosis	22110671	CNVD
Hirschsprung''s Disease	21712996	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Abnormal phenotypes	18644119	CNVD
Cancer	16751803	CNVD
Melanoma	17363583	CNVD
Acute myeloid leukemia	19651601	CNVD
Marfan syndrome	17492313	CNVD
Esophageal adenocarcinoma	18820669	CNVD

Chromatin state (count:319 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:45410200-45418400	Weak transcription	Gastric	stomach
2	chr15:45410200-45421000	Weak transcription	Lung	lung
3	chr15:45410400-45413600	Weak transcription	HUVEC	blood vessel
4	chr15:45410400-45413600	Weak transcription	Osteobl	bone
5	chr15:45410400-45414000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr15:45410400-45414000	Weak transcription	HMEC	breast
7	chr15:45410400-45421400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
8	chr15:45410600-45413200	Weak transcription	Muscle Satellite Cultured Cells	--
9	chr15:45410600-45413600	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
10	chr15:45411000-45414000	Weak transcription	A549	lung
11	chr15:45411200-45413400	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr15:45412200-45413600	Bivalent Enhancer	iPS DF 19.11 Cell Line	embryonic stem cell
13	chr15:45412200-45414200	Strong transcription	Esophagus	oesophagus
14	chr15:45412800-45413000	Bivalent Enhancer	Foreskin Melanocyte Primary Cells skin01	Skin
15	chr15:45413000-45413200	Enhancers	Spleen	Spleen
16	chr15:45413000-45413400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
17	chr15:45413000-45413400	Enhancers	GM12878-XiMat	blood
18	chr15:45413000-45414000	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
19	chr15:45413200-45414000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
20	chr15:45413200-45415000	Enhancers	Muscle Satellite Cultured Cells	--
21	chr15:45413200-45415400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
22	chr15:45413400-45413800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
23	chr15:45413400-45414400	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
24	chr15:45413400-45414400	Enhancers	Stomach Mucosa	stomach
25	chr15:45413600-45414000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
26	chr15:45413600-45414000	Enhancers	Osteobl	bone
27	chr15:45413600-45415000	Enhancers	HUVEC	blood vessel
28	chr15:45413800-45414800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
29	chr15:45414000-45414200	Bivalent Enhancer	Primary hematopoietic stem cells short term culture	blood
30	chr15:45414000-45414200	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Male	--
31	chr15:45414000-45414400	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
32	chr15:45414000-45414400	Bivalent Enhancer	Monocytes-CD14+_RO01746	blood
33	chr15:45414000-45414400	Enhancers	NH-A	brain
34	chr15:45414000-45414400	Flanking Active TSS	Osteobl	bone
35	chr15:45414000-45414600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
36	chr15:45414000-45414600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
37	chr15:45414000-45414600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
38	chr15:45414000-45414600	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
39	chr15:45414000-45414600	Bivalent Enhancer	HepG2	liver
40	chr15:45414000-45414600	Enhancers	HMEC	breast
41	chr15:45414000-45414600	Enhancers	HSMM	muscle
42	chr15:45414000-45414600	Enhancers	NHLF	lung
43	chr15:45414000-45414800	Enhancers	NHDF-Ad	bronchial
44	chr15:45414000-45415200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
45	chr15:45414000-45415200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
46	chr15:45414000-45415200	Enhancers	A549	lung
47	chr15:45414000-45415200	Enhancers	NHEK	skin
48	chr15:45414000-45416000	Enhancers	Placenta Amnion	Placenta Amnion
49	chr15:45414200-45414400	Genic enhancers	Esophagus	oesophagus
50	chr15:45414200-45414400	Bivalent Enhancer	Fetal Muscle Leg	muscle

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links