No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs532715334 |
chr12:66526061-66526062 |
Flanking Active TSS Enhancers Weak transcription Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs529381108 |
chr12:66526085-66526086 |
Flanking Active TSS Enhancers Weak transcription Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs192263297 |
chr12:66526114-66526115 |
Flanking Active TSS Enhancers Weak transcription Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs74097896 |
chr12:66526130-66526131 |
Flanking Active TSS Enhancers Weak transcription Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
5 |
rs569299058 |
chr12:66526137-66526138 |
Flanking Active TSS Enhancers Weak transcription Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs538238262 |
chr12:66526233-66526234 |
Enhancers Weak transcription Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs552529245 |
chr12:66526386-66526387 |
Enhancers Weak transcription Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs139621181 |
chr12:66526420-66526421 |
Enhancers Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs184281270 |
chr12:66526429-66526430 |
Enhancers Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs533748908 |
chr12:66526530-66526531 |
Enhancers Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs142893573 |
chr12:66526537-66526538 |
Enhancers Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs538971323 |
chr12:66526594-66526595 |
Enhancers Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs151020488 |
chr12:66526597-66526598 |
Enhancers Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs573669099 |
chr12:66526601-66526602 |
Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs566290989 |
chr12:66526627-66526628 |
Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs542348810 |
chr12:66526654-66526655 |
Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs535091192 |
chr12:66526684-66526685 |
Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs187110617 |
chr12:66526756-66526757 |
Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs575681091 |
chr12:66526760-66526761 |
Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs144212867 |
chr12:66526841-66526842 |
Enhancers Weak transcription ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs5798808 |
chr12:66526858-66526859 |
Enhancers Weak transcription ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs397850558 |
chr12:66526869-66526870 |
Enhancers Weak transcription ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs74741705 |
chr12:66526870-66526871 |
Enhancers Weak transcription ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs548705851 |
chr12:66526874-66526875 |
Enhancers Weak transcription ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs140938544 |
chr12:66526875-66526876 |
Enhancers Weak transcription ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs564635765 |
chr12:66526876-66526877 |
Enhancers Weak transcription ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs150264167 |
chr12:66526888-66526889 |
Enhancers Weak transcription ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs558895811 |
chr12:66526896-66526897 |
Enhancers Weak transcription ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs147961423 |
chr12:66526995-66526996 |
Enhancers Weak transcription ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs560704468 |
chr12:66526999-66527000 |
Enhancers Weak transcription ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs529485110 |
chr12:66527000-66527001 |
Enhancers Weak transcription ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs141895501 |
chr12:66527008-66527009 |
Enhancers Weak transcription ZNF genes & repeats Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs537855783 |
chr12:66527011-66527012 |
Enhancers Weak transcription ZNF genes & repeats Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs147082709 |
chr12:66527017-66527018 |
Enhancers Weak transcription ZNF genes & repeats Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs531744212 |
chr12:66527025-66527026 |
Enhancers Weak transcription ZNF genes & repeats Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs369025486 |
chr12:66527038-66527039 |
Enhancers Weak transcription ZNF genes & repeats Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs554676355 |
chr12:66527039-66527040 |
Enhancers Weak transcription ZNF genes & repeats Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs374168474 |
chr12:66527049-66527050 |
Enhancers Weak transcription ZNF genes & repeats Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs12823732 |
chr12:66527050-66527051 |
Enhancers Weak transcription ZNF genes & repeats Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
40 |
rs556423136 |
chr12:66527060-66527061 |
Enhancers Weak transcription ZNF genes & repeats Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs149481375 |
chr12:66527069-66527070 |
Enhancers Weak transcription ZNF genes & repeats Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs143084032 |
chr12:66527102-66527103 |
Enhancers Weak transcription ZNF genes & repeats Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs201675057 |
chr12:66527104-66527105 |
Enhancers Weak transcription ZNF genes & repeats Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs77201256 |
chr12:66527130-66527131 |
Enhancers Weak transcription ZNF genes & repeats Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs536036982 |
chr12:66527210-66527211 |
Weak transcription ZNF genes & repeats Enhancers Strong transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs369199366 |
chr12:66527255-66527256 |
Weak transcription ZNF genes & repeats Enhancers Strong transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs575693611 |
chr12:66527282-66527283 |
Weak transcription ZNF genes & repeats Enhancers Strong transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs78460607 |
chr12:66527283-66527284 |
Weak transcription ZNF genes & repeats Enhancers Strong transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs538812457 |
chr12:66527334-66527335 |
Weak transcription ZNF genes & repeats Enhancers Strong transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs371235466 |
chr12:66527367-66527368 |
Weak transcription ZNF genes & repeats Enhancers Strong transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|