The 2.0 version of rSNPBase

Variant report

Variant esv1018247
Chromosome Location chr19:42920205-42920206
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:42906200-42926200 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr19:42906400-42924400 Weak transcription Primary T killer naive cells fromperipheralblood blood
3 chr19:42906400-42926400 Weak transcription Colonic Mucosa Colon
4 chr19:42906600-42926400 Weak transcription Fetal Lung lung
5 chr19:42906800-42923200 Strong transcription Primary neutrophils fromperipheralblood blood
6 chr19:42906800-42924000 Weak transcription A549 lung
7 chr19:42906800-42924400 Weak transcription Osteobl bone
8 chr19:42906800-42925200 Weak transcription Primary hematopoietic stem cells blood
9 chr19:42907000-42924200 Strong transcription Fetal Stomach stomach
10 chr19:42907000-42924400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr19:42907400-42926600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr19:42909000-42925800 Weak transcription Dnd41 blood
13 chr19:42910400-42924200 Weak transcription GM12878-XiMat blood
14 chr19:42911000-42924000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr19:42911000-42924400 Weak transcription H9 Cell Line embryonic stem cell
16 chr19:42911200-42923800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr19:42911600-42923600 Weak transcription Primary T helper cells PMA-I stimulated --
18 chr19:42912200-42925000 Weak transcription Primary hematopoietic stem cells short term culture blood
19 chr19:42912600-42924000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
20 chr19:42912600-42924200 Weak transcription Primary T cells fromperipheralblood blood
21 chr19:42912600-42925600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr19:42912800-42926200 Weak transcription Placenta Amnion Placenta Amnion
23 chr19:42913800-42925800 Weak transcription NHDF-Ad bronchial
24 chr19:42914000-42923600 Weak transcription Lung lung
25 chr19:42914000-42924200 Weak transcription Pancreas Pancrea
26 chr19:42914000-42924400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr19:42914000-42926400 Weak transcription Ovary ovary
28 chr19:42914200-42924400 Weak transcription Duodenum Mucosa Duodenum
29 chr19:42914400-42926000 Weak transcription Duodenum Smooth Muscle Duodenum
30 chr19:42915000-42925600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr19:42915200-42924400 Weak transcription Primary T helper naive cells fromperipheralblood blood
32 chr19:42915200-42925400 Weak transcription Stomach Smooth Muscle stomach
33 chr19:42915200-42925800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr19:42915400-42924000 Weak transcription Brain Germinal Matrix brain
35 chr19:42915400-42924200 Weak transcription NHLF lung
36 chr19:42915800-42920600 Weak transcription Fetal Brain Female brain
37 chr19:42917000-42920600 Strong transcription Fetal Intestine Small intestine
38 chr19:42917000-42923200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr19:42917000-42924000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr19:42917000-42926200 Weak transcription Cortex derived primary cultured neurospheres brain
41 chr19:42917200-42922600 Weak transcription Esophagus oesophagus
42 chr19:42917200-42923000 Weak transcription Left Ventricle heart
43 chr19:42917200-42923400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
44 chr19:42917200-42923400 Weak transcription Right Ventricle heart
45 chr19:42917200-42923600 Weak transcription Gastric stomach
46 chr19:42917200-42923600 Weak transcription Right Atrium heart
47 chr19:42917200-42924200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
48 chr19:42917200-42924400 Weak transcription Rectal Mucosa Donor 29 rectum
49 chr19:42917400-42923600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr19:42917400-42924200 Weak transcription Brain Angular Gyrus brain

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Last update: Aug 31, 2015