Variant report

Variant	esv10382
Chromosome Location	chrX:79211451-79218632
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 36 )
Associated
traits (count: 39 )

Variant overlapped rSNPs/rCNVs (count:36 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs377366675	chrX:79212209-79212210	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
2	rs182917957	chrX:79212228-79212229	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs188767184	chrX:79212255-79212256	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs192845017	chrX:79212270-79212271	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs184114384	chrX:79212271-79212272	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs559448945	chrX:79212301-79212302	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs12557630	chrX:79212362-79212363	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs12557632	chrX:79212368-79212369	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs565017137	chrX:79212369-79212370	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
10	rs187569071	chrX:79212372-79212373	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
11	rs149060436	chrX:79212385-79212386	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs530860653	chrX:79212399-79212400	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs12558031	chrX:79212414-79212415	ZNF genes & repeats Bivalent/Poised TSS	n/a	n/a	Overlapped CNVs	n/a
14	rs12559673	chrX:79212438-79212439	ZNF genes & repeats Bivalent/Poised TSS	n/a	n/a	Overlapped CNVs	n/a
15	rs12559531	chrX:79212506-79212507	ZNF genes & repeats Bivalent/Poised TSS	n/a	n/a	Overlapped CNVs	n/a
16	rs191295901	chrX:79212631-79212632	ZNF genes & repeats Flanking Bivalent TSS/Enh	n/a	n/a	Overlapped CNVs	n/a
17	rs202129189	chrX:79212652-79212653	ZNF genes & repeats Flanking Bivalent TSS/Enh	n/a	n/a	Overlapped CNVs	n/a
18	rs79969365	chrX:79212662-79212663	ZNF genes & repeats Flanking Bivalent TSS/Enh	n/a	n/a	Overlapped CNVs	n/a
19	rs76229367	chrX:79212671-79212672	ZNF genes & repeats Flanking Bivalent TSS/Enh	n/a	n/a	Overlapped CNVs	n/a
20	rs370663601	chrX:79212674-79212675	ZNF genes & repeats Flanking Bivalent TSS/Enh	n/a	n/a	Overlapped CNVs	n/a
21	rs374756975	chrX:79212677-79212678	ZNF genes & repeats Flanking Bivalent TSS/Enh	n/a	n/a	Overlapped CNVs	n/a
22	rs386825915	chrX:79212678-79212679	ZNF genes & repeats Flanking Bivalent TSS/Enh	n/a	n/a	Overlapped CNVs	n/a
23	rs201202208	chrX:79212682-79212683	ZNF genes & repeats Flanking Bivalent TSS/Enh	n/a	n/a	Overlapped CNVs	n/a
24	rs79697129	chrX:79212688-79212689	ZNF genes & repeats Flanking Bivalent TSS/Enh	n/a	n/a	Overlapped CNVs	n/a
25	rs199708845	chrX:79212690-79212691	ZNF genes & repeats Flanking Bivalent TSS/Enh	n/a	n/a	Overlapped CNVs	n/a
26	rs200676314	chrX:79212691-79212692	ZNF genes & repeats Flanking Bivalent TSS/Enh	n/a	n/a	Overlapped CNVs	n/a
27	rs200490672	chrX:79212694-79212695	ZNF genes & repeats Flanking Bivalent TSS/Enh	n/a	n/a	Overlapped CNVs	n/a
28	rs201329936	chrX:79212695-79212696	ZNF genes & repeats Flanking Bivalent TSS/Enh	n/a	n/a	Overlapped CNVs	n/a
29	rs201688855	chrX:79212698-79212699	ZNF genes & repeats Flanking Bivalent TSS/Enh	n/a	n/a	Overlapped CNVs	n/a
30	rs9698614	chrX:79212716-79212717	ZNF genes & repeats Flanking Bivalent TSS/Enh	n/a	n/a	Overlapped CNVs	n/a
31	rs9699145	chrX:79212722-79212723	ZNF genes & repeats Flanking Bivalent TSS/Enh	n/a	n/a	Overlapped CNVs	n/a
32	rs9699147	chrX:79212754-79212755	ZNF genes & repeats Flanking Bivalent TSS/Enh	n/a	n/a	Overlapped CNVs	n/a
33	rs371147817	chrX:79212782-79212783	ZNF genes & repeats Flanking Bivalent TSS/Enh	n/a	n/a	Overlapped CNVs	n/a
34	rs375245914	chrX:79212786-79212787	ZNF genes & repeats Flanking Bivalent TSS/Enh	n/a	n/a	Overlapped CNVs	n/a
35	rs5959002	chrX:79212794-79212795	ZNF genes & repeats Flanking Bivalent TSS/Enh	n/a	n/a	Overlapped CNVs	n/a
36	rs368290397	chrX:79212796-79212797	ZNF genes & repeats Flanking Bivalent TSS/Enh	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:39)

Disease	PMID	Source
Neuroblastoma	18923191	CNVD
Burkitt''s lymphoma	20823134	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
Astrocytoma	17387387	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Metanephric adenoma	20802469	CNVD
Medulloblastoma	21979893	CNVD
Schizophrenia	23904455	CNVD
Olfactory neuroblastoma	18408657	CNVD
infertile	22614455	CNVD
Acute myeloid leukemia	20729466	CNVD
Autism	22495311	CNVD
Cancer	20581869	CNVD
Multiple myeloma	20724749	CNVD
Non-syndromic sensorineural hearing loss	18496225	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
lymphocytic leukemia	21291569	CNVD
Follicular lymphoma	20505157	CNVD
primary effusion lymphomas	17116491	CNVD
Testicular germ cell tumor	18059402	CNVD
Testicular cancer	18059402	CNVD
Seminomas	18059402	CNVD
Glioblastoma multiforme	19960244	CNVD
Endometrial cancer	22040021	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	17387387	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Cancer	22429812	CNVD
Cancer	16751803	CNVD
Premature ovarian failure	20952765	CNVD
Astrocytoma	22246337	CNVD
Mental retardation	17339581	CNVD
Breast cancer	21364760	CNVD
small cell lung cancer	20016488	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Breast cancer	21611746	CNVD

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:79212200-79212800	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
2	chrX:79212400-79212600	Bivalent/Poised TSS	Breast Myoepithelial Primary Cells	Breast
3	chrX:79212600-79212800	Flanking Bivalent TSS/Enh	Breast Myoepithelial Primary Cells	Breast

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links