The 2.0 version of rSNPBase

Variant report

Variant esv1064177
Chromosome Location chr19:18289502-18289503
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:18285000-18290200 Transcr. at gene 5' and 3' Monocytes-CD14+_RO01746 blood
2 chr19:18285200-18289600 Weak transcription Small Intestine intestine
3 chr19:18285400-18296200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr19:18285600-18291800 Weak transcription Primary T regulatory cells fromperipheralblood blood
5 chr19:18286000-18290200 Weak transcription Osteobl bone
6 chr19:18286000-18291200 Weak transcription Brain Hippocampus Middle brain
7 chr19:18286200-18290600 Weak transcription Pancreas Pancrea
8 chr19:18286200-18290800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr19:18286200-18292200 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr19:18286200-18292400 Weak transcription Colon Smooth Muscle Colon
11 chr19:18286200-18294200 Weak transcription Stomach Mucosa stomach
12 chr19:18286400-18290400 Genic enhancers Primary B cells from peripheral blood blood
13 chr19:18286400-18296200 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr19:18286600-18290400 Strong transcription Fetal Intestine Small intestine
15 chr19:18286600-18290800 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr19:18286600-18294200 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr19:18286600-18296200 Weak transcription ES-I3 Cell Line embryonic stem cell
18 chr19:18286600-18296200 Weak transcription K562 blood
19 chr19:18286600-18296400 Weak transcription HepG2 liver
20 chr19:18286600-18302600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr19:18287800-18290000 Strong transcription Fetal Intestine Large intestine
22 chr19:18287800-18290200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
23 chr19:18287800-18293000 Weak transcription Hela-S3 cervix
24 chr19:18287800-18295000 Weak transcription Colonic Mucosa Colon
25 chr19:18288000-18290000 Strong transcription Breast Myoepithelial Primary Cells Breast
26 chr19:18288000-18296400 Weak transcription H9 Cell Line embryonic stem cell
27 chr19:18288200-18294800 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr19:18288400-18302600 Weak transcription Liver Liver
29 chr19:18288600-18290200 Strong transcription Primary neutrophils fromperipheralblood blood
30 chr19:18288800-18290000 Strong transcription Placenta Placenta
31 chr19:18288800-18290000 Strong transcription GM12878-XiMat blood
32 chr19:18288800-18290200 Strong transcription Spleen Spleen
33 chr19:18288800-18290400 Genic enhancers Primary monocytes fromperipheralblood blood
34 chr19:18288800-18291200 Weak transcription Lung lung
35 chr19:18288800-18292200 Weak transcription Adipose Nuclei Adipose
36 chr19:18289000-18289600 Strong transcription Primary B cells from cord blood blood
37 chr19:18289200-18293400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr19:18289200-18294200 Weak transcription Duodenum Mucosa Duodenum
39 chr19:18289400-18290800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
40 chr19:18289400-18291000 Weak transcription Primary hematopoietic stem cells short term culture blood
41 chr19:18289400-18294200 Weak transcription Gastric stomach

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Last update: Aug 31, 2015