The 2.0 version of rSNPBase

Variant report

Variant esv1070799
Chromosome Location chr1:246937461-246937471
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:246888400-246946400 Weak transcription Small Intestine intestine
2 chr1:246888600-246945600 Weak transcription Primary T helper naive cells fromperipheralblood blood
3 chr1:246895000-246942200 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr1:246895400-246938600 Weak transcription Fetal Heart heart
5 chr1:246902800-246952800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr1:246904600-246942800 Weak transcription Primary T cells fromperipheralblood blood
7 chr1:246905000-246945800 Weak transcription Psoas Muscle Psoas
8 chr1:246920800-246944200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr1:246921200-246943200 Strong transcription Dnd41 blood
10 chr1:246921600-246945800 Weak transcription Primary T killer naive cells fromperipheralblood blood
11 chr1:246922200-246944600 Strong transcription Fetal Muscle Trunk muscle
12 chr1:246923200-246945000 Strong transcription Fetal Muscle Leg muscle
13 chr1:246924000-246941200 Strong transcription Primary monocytes fromperipheralblood blood
14 chr1:246924000-246944200 Strong transcription Monocytes-CD14+_RO01746 blood
15 chr1:246924400-246939200 Weak transcription Colonic Mucosa Colon
16 chr1:246924400-246945800 Weak transcription Primary B cells from cord blood blood
17 chr1:246925200-246952200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
18 chr1:246926400-246939200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr1:246928800-246944800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
20 chr1:246930600-246939000 Weak transcription Thymus Thymus
21 chr1:246931200-246937800 Weak transcription NH-A brain
22 chr1:246931200-246940600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr1:246932000-246939200 Weak transcription HUES48 Cell Line embryonic stem cell
24 chr1:246932400-246939000 Weak transcription Pancreas Pancrea
25 chr1:246932400-246945800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr1:246932400-246952000 Weak transcription iPS-15b Cell Line embryonic stem cell
27 chr1:246932600-246938600 Weak transcription Brain Substantia Nigra brain
28 chr1:246932600-246939200 Weak transcription Skeletal Muscle Male skeletal muscle
29 chr1:246932600-246939400 Weak transcription HUES64 Cell Line embryonic stem cell
30 chr1:246932600-246948000 Strong transcription Liver Liver
31 chr1:246932600-246948600 Weak transcription HUES6 Cell Line embryonic stem cell
32 chr1:246932600-246948600 Weak transcription Esophagus oesophagus
33 chr1:246932800-246937800 Weak transcription Brain Cingulate Gyrus brain
34 chr1:246932800-246938400 Weak transcription Rectal Mucosa Donor 29 rectum
35 chr1:246932800-246938600 Weak transcription HUVEC blood vessel
36 chr1:246932800-246938600 Weak transcription Osteobl bone
37 chr1:246932800-246939000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr1:246932800-246939200 Weak transcription Brain Angular Gyrus brain
39 chr1:246932800-246939200 Weak transcription Gastric stomach
40 chr1:246932800-246939200 Weak transcription Spleen Spleen
41 chr1:246932800-246939400 Weak transcription Sigmoid Colon Sigmoid Colon
42 chr1:246932800-246939400 Weak transcription NHLF lung
43 chr1:246932800-246945000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
44 chr1:246932800-246945600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
45 chr1:246932800-246945800 Weak transcription H1 Cell Line embryonic stem cell
46 chr1:246932800-246948800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
47 chr1:246932800-246952400 Weak transcription iPS-20b Cell Line embryonic stem cell
48 chr1:246932800-246956400 Weak transcription H9 Cell Line embryonic stem cell
49 chr1:246933000-246938400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
50 chr1:246933000-246938400 Weak transcription Primary mononuclear cells fromperipheralblood Blood

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Last update: Aug 31, 2015