The 2.0 version of rSNPBase

Variant report

Variant esv1080889
Chromosome Location chr5:96278374-96278375
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:96272600-96281400 Weak transcription Spleen Spleen
2 chr5:96272800-96279000 Weak transcription Esophagus oesophagus
3 chr5:96273000-96279000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
4 chr5:96273000-96285000 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr5:96273000-96288000 Weak transcription Fetal Stomach stomach
6 chr5:96273000-96299200 Weak transcription Aorta Aorta
7 chr5:96273200-96279600 Weak transcription Fetal Muscle Leg muscle
8 chr5:96273400-96278400 Enhancers Primary T killer naive cells fromperipheralblood blood
9 chr5:96273400-96281000 Weak transcription Fetal Lung lung
10 chr5:96273400-96292800 Weak transcription K562 blood
11 chr5:96273600-96280200 Weak transcription HUVEC blood vessel
12 chr5:96273800-96278800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr5:96273800-96283000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
14 chr5:96273800-96285000 Weak transcription Primary hematopoietic stem cells blood
15 chr5:96273800-96287200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr5:96273800-96289600 Weak transcription Fetal Kidney kidney
17 chr5:96273800-96291200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr5:96274200-96280000 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr5:96274400-96279000 Weak transcription NHLF lung
20 chr5:96274400-96279800 Weak transcription Hela-S3 cervix
21 chr5:96274400-96282000 Weak transcription Pancreatic Islets Pancreatic Islet
22 chr5:96274400-96282000 Weak transcription A549 lung
23 chr5:96274400-96288200 Weak transcription Brain Cingulate Gyrus brain
24 chr5:96274600-96279600 Weak transcription Right Atrium heart
25 chr5:96274600-96279600 Weak transcription Stomach Smooth Muscle stomach
26 chr5:96274600-96281000 Weak transcription Small Intestine intestine
27 chr5:96274600-96281200 Weak transcription Brain Anterior Caudate brain
28 chr5:96274600-96281200 Weak transcription Brain Hippocampus Middle brain
29 chr5:96274600-96286000 Weak transcription Adipose Nuclei Adipose
30 chr5:96274600-96287400 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr5:96274600-96288000 Weak transcription Colon Smooth Muscle Colon
32 chr5:96274600-96288800 Weak transcription Duodenum Mucosa Duodenum
33 chr5:96274600-96293000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
34 chr5:96274600-96298400 Weak transcription HSMM muscle
35 chr5:96274800-96288400 Weak transcription HepG2 liver
36 chr5:96275200-96279600 Weak transcription Primary monocytes fromperipheralblood blood
37 chr5:96275800-96284400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr5:96275800-96284800 Weak transcription Primary B cells from cord blood blood
39 chr5:96276000-96288000 Weak transcription Fetal Heart heart
40 chr5:96276400-96279800 Genic enhancers Primary B cells from peripheral blood blood
41 chr5:96276400-96279800 Genic enhancers Primary T cells fromperipheralblood blood
42 chr5:96276600-96278400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr5:96276600-96278600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr5:96276600-96278600 Weak transcription Osteobl bone
45 chr5:96276600-96279000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr5:96276600-96279200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr5:96276600-96279200 Weak transcription HMEC breast
48 chr5:96276600-96288000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
49 chr5:96276800-96282000 Weak transcription Muscle Satellite Cultured Cells --
50 chr5:96277000-96278400 Strong transcription Fetal Intestine Small intestine

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015